- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1706014-1723939.15673.t
Possible name(s)
NOTCH1; NOTCH2; NOTCH3
Gene model
Location
R0 [1,711,793 / 1,717,150]
Amino acid sequence
Length: 173
>Cisavi.CG.ENS81.R0.1706014-1723939.15673.p
GACTDGVNSYTCTCTAGWQGTNCDSNIDDCAANPCVNGACTDGVNSYTCTCTAGWQGTNC
DSDINDCAANPCVNGACTDGVNSYTCTCTAGWQGTNCDSNIDDCAANPCVNGACTDGVNS
YTCTCTAGWQGTNCDSNIDDCAANPCMNGACTDGVNSYTCTCTAGWQGTNCDS
Nucleotide sequence
Length: 522
>Cisavi.CG.ENS81.R0.1706014-1723939.15673.t
ATGGGGCTTGCACTGATGGTGTTAACTCGTATACCTGCACCTGTACTGCTGGATGGCAGG
GAACCAACTGTGATTCAAATATAGATGATTGTGCTGCTAATCCTTGTGTGAATGGAGCTT
GCACTGATGGTGTTAACTCGTATACCTGCACCTGTACTGCTGGATGGCAGGGAACCAACT
GTGATTCTGATATAAATGATTGTGCTGCTAATCCTTGTGTGAATGGAGCTTGCACTGATG
GTGTTAACTCGTATACCTGCACCTGTACTGCTGGATGGCAGGGTACCAACTGTGATTCAA
ATATAGATGATTGCGCTGCTAATCCTTGTGTGAATGGAGCTTGCACTGATGGTGTTAACT
CGTATACCTGCACCTGTACTGCTGGATGGCAGGGAACCAACTGTGATTCAAATATAGATG
ATTGTGCTGCTAATCCTTGTATGAATGGAGCTTGCACTGATGGTGTTAACTCGTATACCT
GCACCTGTACTGCTGGATGGCAGGGAACCAACTGTGATTCAA
| Pfam |
EGF-like_CS (IPR013032) - T[1-18] 3.3E-4 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[1-24] 0.12 - T[26-61] 1.0E-9 - T[63-98] 2.6E-10 - T[100-135] 1.0E-9 - T[137-172] 3.6E-10 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[1-24] 13.121 - T[26-61] 18.666 - T[63-98] 18.332 - T[100-135] 18.666 - T[137-172] 18.989 |
| SMART |
EGF-like_dom (IPR000742) - T[1-24] 72.0 - T[29-61] 1.2E-5 - T[66-98] 1.2E-5 - T[103-135] 1.2E-5 - T[140-172] 4.4E-6 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[3-14] . - T[40-51] . - T[77-88] . - T[114-125] . - T[151-162] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[12-23] . - T[12-23] . - T[49-60] . - T[49-60] . - T[86-97] . - T[86-97] . - T[123-134] . - T[123-134] . - T[160-171] . - T[160-171] . |
| Pfam |
EGF-like_dom (IPR000742) - T[30-58] 9.5E-6 - T[67-95] 9.5E-6 - T[104-132] 9.5E-6 - T[141-169] 3.1E-7 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[50-172] 7.85E-12 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[63-86] . - T[137-160] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SVEP1_HUMAN | 45.198 % | 172 | 4.32E-50 |
| NOTC3_HUMAN | 45.665 % | 172 | 4.2E-50 |
| NOTC2_HUMAN | 47.126 % | 177 | 9.77E-52 |