- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1706014-1723939.15674.t
Possible name(s)
NOTCH1; NOTCH2; NOTCH3
Gene model
Location
R0 [1,716,197 / 1,723,939]
Amino acid sequence
Length: 178
>Cisavi.CG.ENS81.R0.1706014-1723939.15674.p
MFSTWGVKRGTWVQKSLQPVTPCNMKPNVEIPQQQGNHARDGIAAGMRWTTHATMLLVMF
YDFAHNVPQDSPTPHTVQISMNACRALVSMEGYVSTKSTRTNVNAHNHPWESTVKLCDSK
PCLNNGVCTNVLSSYTCSCMPGFNGNNCQTNIDDCAANPCVNGACTDGVNSYTCTCTA
Nucleotide sequence
Length: 1,045
>Cisavi.CG.ENS81.R0.1706014-1723939.15674.t
CTAGGACCATGACTGACAATAAGCCTGAAATATATTTGGCGATATTGTTGGTAGCTACTT
TCAACGTAGTAGTTTGGTCTCAGAATATAGAATCTGACCCGAGATGTAGGATTTCAGTCT
ATTCGAGGCAGAAGTGCTCGACACTGGAACTTTCACGGGAAGCCTGCAACTCAAGAGGGT
GTTGTTACGATGCGAAGCAAACTTATGGGAAATGCTACAGAAGAACTGCAAGACCAATGT
TGTCATTTGGAAGCACAACTCAAGTCAGTCCCACACCTGCTTCTCCATCTGTTGGAACAC
CTGATGATGATAAAATTTTGTCTGCGGTTGCTCTTCTAAGAGACAGTGGTGTAGATCCAT
TGCTTGCAAATTCTTTGCTGTATTCAGAATTTGGTGGAAACAATGTAATTGCCCAAGCTC
TCCTGGGACGGATACTTGGCCCCAACTATTACAAGCTCAACCTATTCAATGAATACAAGC
AAGCAAATTCACCTACTGATACCTCTTAGATGTTCAGCACATGGGGGGTGAAGCGGGGTA
CTTGGGTTCAAAAGTCCTTACAACCTGTAACCCCATGCAATATGAAACCAAATGTGGAAA
TCCCTCAGCAACAAGGGAATCATGCCAGAGATGGAATTGCTGCTGGGATGAGGTGGACAA
CTCATGCTACCATGCTGTTAGTAATGTTTTACGACTTCGCCCACAATGTGCCCCAGGATT
CACCAACCCCCCATACTGTACAGATATCAATGAATGCTTGTCGAGCCCTTGTGTCAATGG
AGGGATATGTATCAACCAAATCAACTCGTACCAATGTCAATGCCCACAACCATCCGTGGG
AGTCAACTGTCAAGCTGTGTGATAGCAAACCGTGTCTCAACAATGGGGTGTGCACCAACG
TGCTATCATCTTACACCTGCTCTTGTATGCCAGGATTCAATGGAAACAATTGCCAAACAA
ATATAGATGATTGTGCTGCTAATCCTTGTGTGAATGGAGCTTGCACTGATGGTGTTAACT
CGTATACCTGCACCTGTACTGCTGG
| Pfam |
S_locus_glycoprot_dom (IPR000858) - T[40-145] 1.9E-6 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[113-149] 19.156 - T[151-178] 10.577 |
| SMART |
EGF-like_dom (IPR000742) - T[116-149] 1.4E-6 - T[154-178] 150.0 |
| Pfam |
EGF-like_dom (IPR000742) - T[117-147] 2.1E-6 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[117-149] 7.4E-4 - T[151-177] 0.025 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[128-139] . - T[165-176] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[137-148] . - T[137-148] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[144-174] . |
| Pfam |
EGF-like_CS (IPR013032) - T[160-176] 0.0019 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOTC2_HUMAN | 50 % | 80.1 | 6.55E-18 |
| CSPG2_HUMAN | 47.541 % | 79 | 2.1E-17 |
| EYS_HUMAN | 47.059 % | 75.9 | 1.89E-16 |