Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'AHC2BAA26YO17' > 
  2. Clone 'cicl041l17' > 
  3. Clone 'cilv005l13' > 
  4. Clone 'cima817553' > 
  5. Transcript 'Cisavi.CG.ENS81.R0.2...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R0.203691-210840.07081.t

Possible name(s)

MIER2; NCOR1; NCOR2

Gene model

Cisavi.CG.ENS81.R0.203691-210840

Location

R0 [203,690 / 210,840]

Sequences

Amino acid sequence

Length: 471

>Cisavi.CG.ENS81.R0.203691-210840.07081.p
MDKGMFHPPSETPQDHPTTHHPSTTQRHGPALQPKLDSAPPPGGSYEQKSKEDLVLAMDK
VDREIAKVESEINRIQKKKTQLEERAKMPPEPEKSASSPQRVEPKHRDLWQVIYAENRKK
AEAARSILDGLCPRYDMPLYNQPCDTDVYQVNLKKNEEMRPKLVKYFKHRSKLQNIRQRY
ICTRYEHLMAQWNRRAERIENNVKKKAKDAKTREFFEKLFPEIRKQREQQERVDRVGTRG
DSCRSDADFAEIVDGLSEQENQLNHMRQLAVVDPMLLDSEEQRIRFISTNGFIREPFKDF
KESQQLDSWTEQEKKIFKEKFIQHPKNFHLIASFIEKKSVADCILYYYLTKKTNNYKALV
RKQSMKAKKPKSGRSHASTQDQVSGNKDGSDKTEDGKKEGEEGTEMKIDRPPSPRMTRAR
KQTMNWTEEEISLVKEGFGKHGKDFGSISRMVSNKSEQQVKNFYHNYKKKH

Nucleotide sequence

Length: 1,423

>Cisavi.CG.ENS81.R0.203691-210840.07081.t
ACAGGAACCGATGGACAAAGGTATGTTTCACCCTCCCAGTGAAACCCCACAAGATCACCC
AACCACACATCACCCATCCACAACCCAACGACATGGACCAGCCCTCCAACCCAAGCTGGA
CTCAGCACCACCACCCGGTGGAAGTTATGAACAGAAATCGAAGGAGGATTTGGTGCTTGC
CATGGATAAAGTGGATCGGGAGATTGCAAAGGTTGAGAGCGAGATCAACCGCATCCAGAA
GAAGAAGACGCAGTTGGAGGAGCGAGCCAAGATGCCCCCGGAGCCCGAGAAGAGCGCCTC
CTCCCCGCAGAGGGTGGAGCCCAAACATAGAGATCTCTGGCAGGTCATCTACGCAGAGAA
CAGGAAAAAGGCTGAAGCTGCCCGATCTATACTGGATGGACTGTGTCCAAGATACGACAT
GCCTCTCTACAATCAACCCTGCGATACCGATGTCTACCAAGTTAATCTCAAAAAAAATGA
AGAAATGCGTCCGAAACTGGTTAAATACTTCAAGCACCGGAGCAAGCTGCAAAATATTCG
ACAACGTTATATTTGTACGAGGTATGAACACTTGATGGCACAATGGAACAGAAGAGCAGA
GAGAATAGAGAACAATGTGAAGAAAAAAGCAAAAGATGCGAAAACTCGTGAATTCTTCGA
GAAGCTCTTCCCGGAGATCCGGAAGCAGCGGGAGCAGCAAGAGAGAGTGGATCGCGTGGG
AACAAGAGGAGACTCGTGTCGAAGCGATGCAGATTTCGCTGAGATCGTAGATGGGTTGTC
GGAGCAGGAGAACCAGTTGAACCACATGCGGCAACTTGCAGTGGTCGACCCCATGTTGTT
AGACAGCGAGGAACAACGAATCAGGTTCATCAGCACAAATGGTTTCATCAGGGAACCTTT
CAAAGACTTCAAGGAAAGCCAACAGCTCGACTCATGGACAGAACAGGAGAAAAAGATCTT
CAAAGAGAAATTCATCCAACATCCGAAGAACTTCCATCTGATTGCTTCGTTCATTGAGAA
AAAGAGTGTTGCAGACTGCATCTTGTATTATTACCTCACAAAGAAGACCAACAATTACAA
AGCTCTTGTTCGGAAACAGAGCATGAAAGCAAAGAAACCAAAATCGGGACGTTCCCATGC
ATCGACACAGGACCAGGTCAGTGGGAATAAGGACGGATCAGACAAAACAGAGGATGGTAA
GAAGGAAGGGGAGGAGGGGACGGAGATGAAGATCGATCGACCACCGTCACCCAGGATGAC
AAGAGCTCGCAAACAAACAATGAATTGGACAGAGGAGGAAATATCGCTCGTCAAAGAAGG
TTTCGGCAAGCACGGGAAAGACTTTGGTTCAATCTCACGAATGGTGTCGAACAAGTCTGA
ACAACAAGTGAAGAATTTCTACCACAATTACAAGAAGAAGCAT

InterProScan

Pfam
N-CoR_GPS2_interact (IPR031557) - T[47-111] 5.5E-19
SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[294-357] 6.58E-15 - T[422-470] 5.46E-11
ProSiteProfiles
SANT_dom (IPR017884) - T[304-355] 20.495 - T[421-471] 17.419
SMART
SANT/Myb (IPR001005) - T[305-353] 9.6E-9 - T[422-470] 3.8E-11
Pfam
SANT/Myb (IPR001005) - T[308-348] 3.1E-6 - T[423-468] 3.7E-10
CDD
SANT/Myb (IPR001005) - T[425-468] 3.50263E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NCOR1_HUMAN 57.233 % 370 2.82E-114
NCOR2_HUMAN 54.277 % 373 1.62E-115