- Clone 'cien52250' >
- Clone 'cien32955' >
- Transcript 'Boleac.CG.SB_v3.S836...' >
- EST 'FK166360.1' >
- Transcript 'Cisavi.CG.ENS81.R0.3...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.3134182-3143755.17964.t
Possible name(s)
MITF; TFE3; TFEB
Gene model
Location
R0 [3,134,181 / 3,143,755]
Amino acid sequence
Length: 317
>Cisavi.CG.ENS81.R0.3134182-3143755.17964.p
MEEKKMRQQSQKNSGISQSGSSTSRINVPVLTVTTPQLPVQVLKVETGLQNPTRYYIRET
QRNQVREYLSQSQQDGSKYGVRQLFNPAQSAPTTGDAHYGSTPASPLSRLNLSGDNMTDI
IDDIVSLESSLDESRYDRSSTTLPTVSPTDINSYAHSTAHSLPLVSNETSSSCPLIKREF
TEEDAQLFTKDRIKKDNHNIIERRRRYNINDRIRELGQLVPKSSDPELRWNKGSILKAAV
DYIQHLQANQGKRKALEQRNKQMENMNKKLLLRVQQLEMMVQQCGISMPSGNSDTQNIMS
TLLNFDGAVPNDALFTA
Nucleotide sequence
Length: 1,041
>Cisavi.CG.ENS81.R0.3134182-3143755.17964.t
ACTTGTTTTGCAACTGGTACAGAAAACAAGTGGTCAAAATGGGAAGTCGCGCTAATATGA
AAATGCAGCTGCAGAGGGACTAGGCCCTTATGGAGGAAAAGAAAATGAGGCAGCAATCCC
AGAAGAATTCTGGGATATCCCAAAGTGGCTCTTCAACATCTAGGATCAATGTACCTGTTT
TAACCGTAACTACCCCTCAACTTCCAGTGCAAGTTCTCAAGGTTGAAACTGGTCTGCAGA
ACCCGACGCGATATTATATTCGTGAAACACAACGCAACCAAGTACGTGAATATCTTAGCC
AATCGCAACAGGACGGTTCAAAGTATGGCGTTCGGCAGCTCTTTAACCCTGCTCAAAGCG
CACCTACAACAGGCGATGCACACTATGGAAGTACACCTGCAAGCCCACTTTCTCGCCTCA
ACCTGTCAGGCGATAATATGACGGATATTATCGATGACATAGTAAGCCTCGAGTCCAGCC
TGGACGAATCACGGTATGACCGTTCGTCTACCACGCTACCCACGGTGTCACCAACTGATA
TAAATAGTTATGCTCACTCCACCGCCCACTCGCTTCCTCTGGTGTCCAATGAGACCTCAT
CGTCTTGTCCGCTCATCAAACGAGAGTTCACAGAAGAAGACGCACAACTTTTCACAAAGG
ATCGCATCAAAAAAGACAATCATAACATAATCGAAAGGCGGCGTAGATACAATATCAATG
ATCGGATTCGTGAACTTGGTCAACTTGTGCCCAAGTCTTCTGACCCTGAACTCCGTTGGA
ACAAAGGCTCCATATTAAAAGCGGCAGTTGATTATATACAGCATTTACAAGCAAATCAAG
GAAAGCGTAAAGCGCTAGAACAACGGAATAAACAAATGGAAAATATGAACAAGAAACTTT
TGCTGCGTGTACAGCAACTGGAGATGATGGTACAACAGTGTGGTATAAGTATGCCATCAG
GCAACAGCGATACACAGAATATAATGAGCACTCTTTTAAACTTCGACGGCGCTGTTCCAA
ACGATGCACTCTTTACTGCAG
| Pfam |
MiT/TFE_N (IPR031867) - T[2-124] 1.5E-20 |
| PANTHER |
TFEB (IPR024098) - T[5-296] 5.3E-95 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[191-258] 7.85E-17 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[193-246] 16.761 |
| Pfam |
bHLH_dom (IPR011598) - T[194-247] 2.3E-18 |
| CDD |
bHLH_dom (IPR011598) - T[194-250] 5.46862E-15 |
| SMART |
bHLH_dom (IPR011598) - T[199-252] 7.2E-16 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[204-285] 6.0E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TFE3_HUMAN | 43.581 % | 215 | 1.46E-65 |
| TFEB_HUMAN | 38.591 % | 191 | 3.23E-57 |
| MITF_HUMAN | 41.304 % | 193 | 1.93E-57 |