Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R0.346496-352045.09238.t

Possible name(s)

UBE2D4; UBE2L3; UBE2L6

Gene model

Cisavi.CG.ENS81.R0.346496-352045

Location

R0 [346,495 / 352,045]

Sequences

Amino acid sequence

Length: 152

>Cisavi.CG.ENS81.R0.346496-352045.09238.p
MAATRRLQQEMLGIQGEGVKTYRFLDGDDKNLLSWKMLLIPDFVPYNKGAFRIDIVFPAE
YPFKPPKITFKTKIYHPNVDEKGQICLPIISPENWKPATKAVQVLHAVLALMAAPEPEHP
LRGDLAEEYTKDKNKFLKNAEDYTKKHAEKRQ

Nucleotide sequence

Length: 859

>Cisavi.CG.ENS81.R0.346496-352045.09238.t
GTATGCGATCTGATTTTGTCAGGTCCGACTATTTATCCCAAACTTCATAAAACATCTTGC
TGAAATGGCAGCAACAAGGCGATTGCAACAGGAAATGTTGGGTATACAGGGCGAGGGAGT
AAAAACTTATAGATTTTTGGATGGTGATGATAAGAATTTACTCTCGTGGAAAATGCTCTT
GATTCCTGACTTTGTGCCTTACAACAAGGGGGCATTTCGAATTGATATCGTTTTCCCTGC
AGAATATCCTTTTAAACCCCCCAAGATTACATTTAAGACTAAGATTTACCACCCAAACGT
AGATGAAAAAGGCCAAATCTGCCTCCCAATCATAAGTCCAGAAAATTGGAAGCCAGCTAC
CAAAGCTGTACAAGTATTGCACGCAGTTCTGGCTCTTATGGCGGCACCTGAACCAGAACA
TCCACTTCGGGGTGATCTGGCAGAGGAATACACTAAAGACAAAAATAAGTTTTTAAAAAA
TGCGGAAGACTACACCAAAAAACACGCAGAAAAACGGCAATAGTATCCAACCATATACTT
GTGTGTACGATACAATGGCCATGGTAGAAACATCAATTTTTGTTTCCTAATTTATTACCA
TGTAAAACGAAGCGCCTAAATTCTATTGTTTATAGCACTTTTATGGCACAAAACTATCCT
CCAATACAAGATCTATAATCCAGCCTGTCCCATTCATTTAATTTGTGTTGTGAATTGTGA
GATAAAATTCCTGTTTTTACGTGGTTTGTGCAAATAAAATTTGCTCTTAGTAATATTTTC
CCATTTAAAATGCATTGTTTTGTGTGTATTATTTAATATGCAAATAGTGTGTGATGCGTA
ATACACATAAGAGTCGTTT

InterProScan

Gene3D	UBQ-conjugating_enzyme/RWD (IPR016135) - T[1-152] 7.7E-52
SUPERFAMILY	UBQ-conjugating_enzyme/RWD (IPR016135) - T[2-150] 2.49E-43
CDD	UBQ-conjugat_E2 (IPR000608) - T[4-144] 4.92931E-52
ProSiteProfiles	UBQ-conjugat_E2 (IPR000608) - T[5-138] 32.742
Pfam	UBQ-conjugat_E2 (IPR000608) - T[8-143] 1.7E-39
ProSitePatterns	UBQ-conjugating_AS (IPR023313) - T[75-90] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UB2L3_HUMAN	65.563 %	218	4.01E-74
UB2L5_HUMAN	64.238 %	216	2.05E-73
UB2L6_HUMAN	51.656 %	154	8.43E-49