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TRANSCRIPT CARD

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  1. Clone 'cima863873' > 
  2. Molecular Tool 'OtxHDenR' > 
  3. Clone 'cilv038a11' > 
  4. Transcript 'Moocci.CG.ELv1_2.S62...' > 
  5. Transcript 'Cisavi.CG.ENS81.R106...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R1063.3461-8924.04206.t

Possible name(s)

CHDH

Gene model

Cisavi.CG.ENS81.R1063.3461-8924

Location

R1063 [3,472 / 8,419]

Sequences

Amino acid sequence

Length: 540

>Cisavi.CG.ENS81.R1063.3461-8924.04206.p
SYFQVGAGTSGCVVASRLSEANNTRVLVLEAGDEDVPNAVISVPGMYGQAFNTKLDWGFE
TIPQKQACKSLRWPRGKVLGGSSSINALIYTRGSPRDFDLWSQMGATGWNYSEILPFYKK
LESSGARDPLKMRGNDGPLRTTMLRELEKSEDFVNAGLELGYKKGDCNGGQFEGFHFVEA
TMRNGARETASTAYIRPAVRERPNQLHVVVNAQVEKVVFEGKTAVGVTFIKNGIRSFVRA
RKEVILSAGAVSTPHLLMLSGIGDKRHLSSLNITTIADIPGVGANLQDHFLTFGHFIDVE
AKVRLISVLPQEFVSIFSYIWSGTGKIANNMVCNAFAFIEFNNTSETKSSRLHHFFNLVN
PQFRSTAFNQAKNTKQELLSTFSIAPCLMTPHSSGSIRLKSSDPLEMPLIDPNYLSDPKD
VELMVQGIWQIQQLFANSIQSSSSYTTNARTNPGNILPVEDLYKCLVRMETMTSYHPCCT
AKMGKDKMAVVDPRLRVYNVQGLRIADASIMPVITSANTQGPCYMIGEKAAHMIKQDWDL

Nucleotide sequence

Length: 1,620

>Cisavi.CG.ENS81.R1063.3461-8924.04206.t
TCTTATTTTCAAGTTGGTGCTGGTACCAGTGGATGTGTTGTCGCTAGTCGTCTCAGCGAA
GCCAACAATACAAGGGTCTTGGTTCTGGAAGCTGGTGATGAAGATGTACCTAATGCAGTG
ATAAGTGTCCCTGGAATGTATGGTCAAGCTTTTAACACAAAGTTAGATTGGGGTTTTGAG
ACCATACCACAGAAGCAAGCGTGTAAATCACTTCGTTGGCCCCGCGGGAAGGTCCTGGGT
GGTTCGAGTTCAATCAATGCACTTATCTACACCCGTGGTAGCCCACGTGACTTTGACCTG
TGGAGTCAAATGGGGGCGACTGGTTGGAATTATAGCGAGATTCTTCCGTTTTATAAAAAG
TTGGAATCTTCTGGAGCCCGAGATCCATTGAAAATGCGGGGGAATGATGGGCCGCTGCGA
ACAACTATGCTTAGAGAGTTGGAAAAATCTGAAGACTTTGTAAACGCTGGTTTAGAATTG
GGATACAAGAAAGGGGATTGTAACGGTGGCCAGTTTGAAGGATTTCATTTTGTTGAGGCC
ACGATGCGTAATGGTGCGCGGGAGACGGCATCCACCGCCTATATTCGCCCTGCGGTTCGG
GAAAGGCCAAATCAGCTACATGTTGTAGTGAATGCTCAGGTCGAAAAGGTTGTCTTCGAG
GGAAAGACTGCCGTCGGGGTAACGTTTATCAAAAATGGAATAAGAAGCTTTGTTCGAGCG
AGGAAGGAAGTCATTTTAAGCGCAGGAGCAGTGTCCACTCCCCATCTGCTGATGTTAAGT
GGAATCGGGGACAAACGACATTTATCCAGTCTTAACATAACTACGATAGCCGACATTCCC
GGGGTTGGGGCGAACCTACAAGATCATTTCCTCACTTTTGGACATTTTATTGACGTCGAA
GCTAAAGTTCGACTAATCTCCGTTCTGCCACAGGAATTCGTGTCGATATTTAGCTACATT
TGGTCCGGAACAGGGAAAATCGCAAATAACATGGTGTGTAATGCTTTTGCGTTCATCGAA
TTCAACAACACTTCTGAGACCAAATCATCGCGTTTGCACCACTTCTTTAATCTTGTTAAT
CCTCAGTTCCGGTCCACAGCCTTTAACCAGGCTAAAAACACAAAGCAGGAGTTGTTATCG
ACATTTTCAATCGCTCCATGCCTCATGACACCTCACAGCAGCGGCTCGATTAGGTTGAAG
TCATCTGACCCACTGGAAATGCCTCTTATCGATCCAAATTATTTATCCGATCCTAAGGAC
GTTGAGCTCATGGTACAAGGTATCTGGCAAATACAACAACTTTTCGCAAACTCAATACAA
AGCAGCAGTTCTTATACGACGAATGCAAGAACAAATCCAGGTAACATTTTACCAGTGGAA
GATTTGTACAAGTGTTTGGTGAGAATGGAGACTATGACATCATATCATCCGTGTTGCACT
GCAAAGATGGGAAAAGACAAAATGGCGGTCGTTGATCCAAGATTGAGGGTGTACAATGTA
CAAGGATTGAGAATAGCTGATGCCTCCATCATGCCAGTAATCACATCGGCCAATACTCAA
GGACCTTGCTACATGATCGGCGAAAAAGCTGCACATATGATCAAGCAAGATTGGGATTTG

InterProScan

PIRSF
GMC_OxRdtase (IPR012132) - T[2-540] 1.1E-143
Gene3D
FAD/NAD-bd_sf (IPR036188) - T[5-38] 1.6E-164 - T[75-124] 1.6E-164 - T[190-283] 1.6E-164 - T[476-535] 1.6E-164
SUPERFAMILY
FAD/NAD-bd_sf (IPR036188) - T[5-283] 2.72E-72 - T[479-539] 2.72E-72
Pfam
GMC_OxRdtase_N (IPR000172) - T[5-290] 1.5E-72
ProSitePatterns
GMC_OxRdtase_N (IPR000172) - T[76-99] . - T[249-263] .
Pfam
GMC_OxRtase_C (IPR007867) - T[391-530] 8.7E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CHDH_HUMAN 36.042 % 304 2.69E-96