- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Clone 'cicl008h14' >
- Transcript 'KH2012:KH.L116.66.v1...' >
- Transcript 'KH2012:KH.L170.28.v5...' >
- Transcript 'Cisavi.CG.ENS81.R106...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R1063.3461-8924.04208.t
Possible name(s)
CHDH
Gene model
Location
R1063 [3,487 / 8,404]
Amino acid sequence
Length: 497
>Cisavi.CG.ENS81.R1063.3461-8924.04208.p
GAGTSGCVVASRLSEANNTRVLVLEAGDEDVPNAVISVPGMYGQAFNTKLDWGFETIPQK
QACKSLRWPRGKVLGGSSSINALIYTRGSPRDFDLWSQMGATGWNYSEILPFYKKLESSG
ARDPLKMRGNDGPLRTTMFRELEKSEDFVNAGLELGDCNGGQFEGFHFVEATMRNGARET
ASTAYIRPAVRERPNQLHVVVNAQVEKVVFEGKTAVGVTFIKNGIRSFVRARKEVILSAG
AVSTPHLLMLSGIGDKRHLSSLNITTIADIPGVGANLQDHFLTFGHFIDVEAKVRSLYDF
LLKYFQHGRQSETKSSRLHHFFNLVNPQFRSTAFNQAKNTKQELLSTFSIAPCLMTPHSS
GSIRLKSSDPLEMPLIDPNYLSDPKDVELMVQAFGLVDKLANTTTFRKLNTKQQLKGKFY
INGHIPCLVRMETMTSYHPCCTAKMGKDKMAVVDPRLRVYNVQGLRIADASIMPVITSAN
TQGPCYMIGEKAAHMIK
Nucleotide sequence
Length: 1,491
>Cisavi.CG.ENS81.R1063.3461-8924.04208.t
GGTGCTGGTACCAGTGGATGTGTTGTCGCTAGTCGTCTCAGCGAAGCCAACAATACAAGG
GTCTTGGTTCTGGAAGCTGGTGATGAAGATGTACCTAATGCAGTGATAAGTGTCCCTGGA
ATGTATGGTCAAGCTTTTAACACAAAGTTAGATTGGGGTTTTGAGACCATACCACAGAAG
CAAGCGTGTAAATCACTTCGTTGGCCCCGCGGGAAGGTCCTGGGTGGTTCGAGTTCAATC
AATGCACTTATCTACACCCGTGGTAGCCCACGTGACTTTGACCTGTGGAGTCAAATGGGG
GCGACTGGTTGGAATTATAGCGAGATTCTTCCGTTTTATAAAAAGTTGGAATCTTCTGGA
GCCCGAGATCCATTGAAAATGCGGGGGAATGATGGGCCGCTGCGAACAACTATGTTTAGA
GAGTTGGAAAAATCTGAAGACTTTGTAAACGCTGGTTTAGAATTGGGGGATTGTAACGGT
GGCCAGTTTGAAGGATTTCATTTTGTTGAGGCCACGATGCGTAATGGTGCGCGGGAGACG
GCATCCACCGCCTATATTCGCCCTGCGGTTCGGGAAAGGCCAAATCAGCTACATGTTGTA
GTGAATGCTCAGGTCGAAAAGGTTGTCTTCGAGGGAAAGACTGCCGTCGGGGTAACGTTT
ATCAAAAATGGAATAAGAAGCTTTGTTCGAGCGAGGAAGGAAGTCATTTTAAGCGCAGGA
GCAGTGTCCACTCCCCATCTGCTGATGTTAAGTGGAATCGGGGACAAACGACATTTATCC
AGTCTTAACATAACTACGATAGCCGACATTCCCGGGGTTGGGGCGAACCTACAAGATCAT
TTCCTCACTTTTGGACATTTTATTGACGTCGAAGCTAAAGTTCGAAGTTTATACGACTTT
TTGTTGAAATACTTCCAACATGGACGACAAAGTGAGACCAAATCATCGCGTTTGCACCAC
TTCTTTAATCTTGTTAATCCTCAGTTCCGGTCCACAGCCTTTAACCAGGCTAAAAACACA
AAGCAGGAGTTGTTATCGACATTTTCAATCGCTCCATGCCTCATGACACCTCACAGCAGC
GGCTCGATTAGGTTGAAGTCATCTGACCCACTGGAAATGCCTCTTATCGATCCAAATTAT
TTATCCGATCCTAAGGACGTTGAGCTCATGGTACAAGCGTTTGGACTGGTGGATAAGCTG
GCAAATACAACAACTTTTCGCAAACTCAATACAAAGCAGCAGTTAAAAGGTAAATTTTAC
ATAAATGGACACATTCCTTGTTTGGTGAGAATGGAGACTATGACATCATATCATCCGTGT
TGCACTGCAAAGATGGGAAAAGACAAAATGGCGGTCGTTGATCCAAGATTGAGGGTGTAC
AATGTACAAGGATTGAGAATAGCTGATGCCTCCATCATGCCAGTAATCACATCGGCCAAT
ACTCAAGGACCTTGCTACATGATCGGCGAAAAAGCTGCACATATGATCAAG
| PIRSF |
GMC_OxRdtase (IPR012132) - T[1-317] 9.5E-87 - T[298-497] 4.0E-51 |
| SUPERFAMILY |
FAD/NAD-bd_sf (IPR036188) - T[1-274] 1.09E-70 - T[441-497] 1.09E-70 |
| Pfam |
GMC_OxRdtase_N (IPR000172) - T[1-281] 9.1E-68 |
| Gene3D |
FAD/NAD-bd_sf (IPR036188) - T[1-27] 3.3E-155 - T[181-279] 3.3E-155 - T[360-377] 3.3E-155 - T[440-496] 3.3E-155 |
| Gene3D |
Glucose_Oxidase_domain_2 (IPR027424) - T[28-85] 3.3E-155 - T[169-180] 3.3E-155 |
| ProSitePatterns |
GMC_OxRdtase_N (IPR000172) - T[71-94] . - T[240-254] . |
| Pfam |
GMC_OxRtase_C (IPR007867) - T[357-492] 2.0E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CHDH_HUMAN | 36.007 % | 288 | 1.07E-90 |