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- Transcript 'Cisavi.CG.ENS81.R107...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R107.1010672-1014203.05134.t
Possible name(s)
BMP4; LEFTY1; LEFTY2
Gene model
Location
R107 [1,010,671 / 1,014,201]
Amino acid sequence
Length: 379
>Cisavi.CG.ENS81.R107.1010672-1014203.05134.p
FDSFRTMIIIVLFLALVMTSQASNVIQDGILTHLGLGEVPRFTHNEVRNVVIPDETRRKY
ERMVEKMTKLERNRRSSSLQDLFRSVHKKTGIEGDVIYSDTFREELKFDMEGRLPDNYMI
SMAELRLFKKLPNHNRILSRMRTPSGNWNDVQLSSARGRTQVIRNARVSIHLSLPLPDGG
AVTELVDSRLILVNGSGWHTFDVTSAIRKWRRHPVRYMTITLELKVHSSSPGRAAAELAR
LIRFTGQRVALDSPRRPELVVYTNVKEPARTSDCSSSRHNRQHKCCRENRFVNFRETKWS
KHWILEPAGFNAYHCAGGCRSDRRRNSKGAPRSCSASETNSLPIMYLVKKGGVVQVEVSE
FPNMVIEKCSCALDSGYEV
Nucleotide sequence
Length: 1,211
>Cisavi.CG.ENS81.R107.1010672-1014203.05134.t
TTCGATTCATTCAGAACAATGATCATTATCGTCCTGTTCCTCGCATTGGTTATGACGTCA
CAAGCATCCAACGTCATTCAAGATGGAATTCTGACCCACCTGGGGTTAGGGGAAGTACCA
CGATTCACCCACAACGAAGTTAGGAACGTGGTGATACCGGACGAAACAAGAAGGAAATAC
GAAAGAATGGTGGAAAAAATGACAAAATTGGAAAGAAACCGAAGATCGAGTTCCTTGCAA
GATTTATTTCGTTCTGTGCACAAAAAGACCGGTATTGAAGGTGACGTCATTTATTCTGAT
ACTTTTCGCGAAGAATTGAAATTCGACATGGAAGGAAGACTCCCCGATAATTATATGATC
TCTATGGCTGAACTTCGATTGTTCAAAAAACTACCCAACCACAACCGGATTCTCTCCCGA
ATGAGAACGCCATCTGGTAACTGGAATGATGTTCAACTTTCATCCGCAAGAGGGCGGACA
CAAGTAATACGCAATGCTCGGGTCTCGATTCATCTGTCGCTTCCACTTCCGGATGGTGGC
GCTGTTACAGAACTAGTTGATTCAAGACTTATCCTGGTAAACGGTTCCGGTTGGCATACT
TTTGACGTCACTTCCGCGATCCGGAAATGGCGTCGACATCCGGTGAGGTATATGACAATC
ACACTGGAGCTGAAAGTGCATAGTTCGAGCCCCGGTCGAGCGGCGGCCGAATTGGCACGT
TTGATCAGATTTACCGGGCAGAGGGTGGCGCTAGACTCACCAAGACGGCCGGAACTGGTC
GTGTACACAAACGTGAAGGAACCAGCCAGAACGAGTGATTGTTCCTCATCACGTCATAAT
CGCCAACACAAATGTTGCCGCGAAAATCGATTCGTCAATTTCCGTGAAACGAAGTGGTCG
AAACATTGGATTCTTGAACCGGCCGGGTTCAATGCGTACCATTGCGCCGGAGGATGTCGC
TCCGATCGCCGCAGAAACAGCAAAGGAGCCCCGAGGTCTTGCAGCGCTTCAGAAACTAAC
TCCTTACCGATCATGTATTTAGTCAAAAAAGGCGGCGTCGTTCAAGTTGAAGTTTCGGAA
TTTCCTAATATGGTTATTGAGAAGTGCTCTTGTGCGCTAGATAGTGGTTATGAGGTGTGA
ATTGTGTTTGATTTTTCTATTTTTTTGTTTTTATTTTTCACTGATGTTCCAATAAACTAC
CCCACGCGTGA
| PIRSF |
LRDF (IPR003942) - T[1-379] 8.8E-155 |
| PANTHER |
TGF-beta-rel (IPR015615) - T[6-374] 9.5E-117 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[18-226] 4.3E-16 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[265-372] 23.169 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[273-372] 5.9E-21 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[277-371] 1.03E-19 |
| Pfam |
TGF-b_C (IPR001839) - T[284-371] 1.7E-11 |
| SMART |
TGF-b_C (IPR001839) - T[285-372] 8.1E-8 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[304-319] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LFTY2_HUMAN | 30.789 % | 157 | 9.63E-45 |
| LFTY1_HUMAN | 30.789 % | 159 | 2.89E-45 |