- Transcript 'KH2012:KH.L95.1.v2.A...' >
- Transcript 'Cisavi.CG.ENS81.R107...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R107.324117-331918.03246.t
Possible name(s)
TBR1; TBX21; TBX5
Gene model
Location
R107 [324,116 / 331,918]
Amino acid sequence
Length: 799
>Cisavi.CG.ENS81.R107.324117-331918.03246.p
MAYSEVQFPGQHCAVGGQQFQGNLQYFGAMAPNYQGMGQHHKPWPVNQDFNANENYQPQN
FMRQMQPSPNGPTQMWNTNQRCDVPVYNPHPMTPMISNVNYQQHGYSRQRVNSATSDGCP
TPQPNHWMSQQSPTMWSPSGMSNQSRSRPASLSDAGQLTPDNYYQTQNHQYQMNQQRSNQ
PYQPPYNGPPGMGASYMGAVSPASSNPNSPPLLPMLQSRSMQANPIMMSHRQPPTPVNIP
NPPPQTSTAKVQGSDWELECMGVTIKLASADLWKHFENVTTEMVISKHGRRMFPVLEYDV
NGLNPGKLYNIFIDFVLANNYVWKYVDQKWQATGLASTEEPGFHPGQRVYLHPDSPALGD
VWNKKGAGFGKMKLSNHLHDEKEKIITLRTLHKYQPRLHIVEVDHRNPTLQSNLRTFVLP
KTTFMTVTLYHDTDVAQLKINLNPFARSFRDKAVCTKPSDPGNSSSNSSSMSQTSSPLTS
SDDIDTSGIPESHESDPVGHNPSEIIKVENPVQSIDIEKAKRFLNKQLSVMSQLVQKSEE
LERNSNVNKNVDSKPRQVIEIPDPTEGDSPGESLEELLKPQTVHHFAPPSEEAKSEKKNQ
SNVPASLADYQLLNVDRCFPPNAVAPLSDRLPFDPASLKRDEQNQDNQSVLPTFFDCTYY
REQAGASMIKNEVKTEPSTSNPSDLPIIYVPSPNNASTTNDVITTSLPPVDVGATSHSSP
ITYPSSPTRSEMAPFTPLPTLSPNCLRNMLLGDDSTEIFASSSKRKHQDDDDDDDVFFNS
PGEFEFLASHPKRGCYYGA
Nucleotide sequence
Length: 2,534
>Cisavi.CG.ENS81.R107.324117-331918.03246.t
ATGGCTTATTCAGAAGTCCAGTTCCCGGGACAGCACTGTGCTGTCGGCGGGCAACAGTTT
CAGGGAAACCTGCAGTATTTCGGTGCGATGGCGCCGAACTACCAAGGCATGGGCCAGCAC
CATAAACCGTGGCCTGTGAACCAAGATTTCAACGCGAACGAGAACTACCAGCCTCAGAAT
TTCATGCGACAAATGCAGCCTTCGCCGAACGGACCAACCCAAATGTGGAACACCAATCAA
CGGTGCGATGTCCCGGTCTATAACCCACACCCAATGACGCCGATGATAAGCAATGTGAAC
TATCAGCAACATGGCTACAGCAGACAAAGGGTAAACAGCGCCACTAGTGACGGGTGTCCG
ACTCCACAACCTAACCACTGGATGTCGCAACAGAGTCCGACCATGTGGTCCCCATCGGGA
ATGAGCAACCAATCGCGCTCCCGTCCAGCAAGCTTGTCCGACGCCGGTCAACTTACCCCC
GACAACTATTACCAAACCCAGAACCATCAATACCAGATGAACCAACAGCGGAGCAACCAA
CCCTACCAGCCGCCATACAACGGTCCCCCGGGAATGGGGGCGTCCTACATGGGGGCCGTT
TCACCCGCTTCATCGAACCCCAATTCGCCCCCGTTGCTACCTATGCTGCAGTCGCGCTCG
ATGCAAGCGAATCCAATTATGATGTCACACAGGCAACCGCCTACGCCAGTAAACATTCCC
AACCCCCCGCCCCAAACCTCCACAGCCAAAGTACAGGGAAGCGATTGGGAATTGGAATGC
ATGGGGGTCACCATCAAACTGGCCAGTGCTGATCTATGGAAGCATTTTGAAAACGTCACG
ACGGAGATGGTGATTAGTAAACACGGACGGAGAATGTTCCCTGTTCTTGAATACGACGTG
AACGGACTTAATCCTGGCAAACTCTACAACATCTTCATTGATTTTGTGCTCGCGAACAAC
TACGTCTGGAAATACGTTGATCAGAAATGGCAGGCTACCGGGCTAGCTTCGACCGAAGAG
CCAGGATTTCACCCGGGACAGCGAGTTTACCTTCACCCCGATTCTCCAGCGCTGGGTGAT
GTTTGGAACAAAAAAGGAGCTGGATTTGGAAAGATGAAACTCAGTAACCATTTGCACGAC
GAAAAGGAAAAGATTATCACTCTTCGAACGTTGCACAAGTATCAGCCTCGACTGCATATC
GTTGAGGTTGATCATAGAAATCCCACGTTACAATCGAATCTTCGAACATTCGTGCTTCCC
AAAACCACTTTCATGACCGTTACCCTGTACCATGATACCGATGTAGCTCAACTGAAGATA
AACCTGAACCCATTTGCAAGATCTTTTAGGGACAAAGCAGTTTGCACGAAACCCAGTGAC
CCCGGAAACTCGTCATCTAACTCGTCATCAATGTCCCAAACCTCGTCACCGCTTACGTCA
TCAGATGACATCGATACGTCGGGGATTCCCGAGTCGCACGAATCGGACCCGGTTGGCCAC
AACCCGAGCGAAATAATCAAAGTCGAAAACCCGGTCCAGAGTATTGACATCGAAAAGGCG
AAGCGCTTCTTAAACAAACAACTAAGTGTGATGTCACAGTTGGTTCAGAAGAGCGAAGAG
TTGGAAAGAAACTCGAATGTAAACAAAAACGTCGATTCAAAACCGAGGCAAGTAATAGAA
ATCCCAGACCCGACCGAGGGGGATTCCCCCGGGGAATCGTTGGAAGAATTGCTCAAACCT
CAGACTGTTCACCACTTCGCACCGCCCAGTGAAGAGGCAAAGTCGGAAAAGAAGAATCAA
TCGAACGTCCCCGCGTCCTTGGCCGATTATCAACTTTTGAACGTCGATCGATGTTTCCCG
CCCAACGCTGTAGCGCCGCTTAGTGACCGGTTGCCATTTGATCCAGCTTCACTGAAAAGG
GATGAACAGAATCAAGATAACCAGTCAGTTCTGCCGACATTCTTCGATTGCACATACTAT
CGGGAGCAAGCCGGGGCATCAATGATCAAGAACGAAGTGAAAACAGAACCTTCAACCTCT
AATCCATCTGACCTGCCGATCATATACGTTCCTTCACCAAACAACGCCTCTACAACCAAT
GACGTCATCACAACGTCATTACCTCCCGTTGACGTCGGTGCAACGTCACACTCCAGCCCC
ATAACTTACCCGTCGTCCCCAACCCGAAGTGAGATGGCCCCATTCACCCCTTTGCCTACC
TTATCGCCTAACTGTCTCCGCAATATGTTACTTGGGGATGACTCGACTGAAATTTTTGCA
TCGTCATCGAAACGTAAGCATCAAGATGACGACGACGACGATGACGTTTTCTTTAACTCG
CCCGGTGAATTTGAATTCCTTGCCTCCCACCCAAAACGTGGTTGTTACTACGGTGCATAG
CTCTAACCAGTATTATGTATGTGTATAATTTGTGACTCACCCTAAAGTTCAAACTGTGCC
TTAATTCTTTTACTTCTTGTTATTTGTTATTTCGTTTTAACAAGATATGCGTTTACTCAA
TTGTGTTTTTATAT
| Gene3D |
T-box_sf (IPR036960) - T[254-452] 1.5E-62 |
| SMART |
TF_T-box (IPR001699) - T[262-456] 1.9E-68 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[263-451] 6.59E-61 |
| Pfam |
TF_T-box (IPR001699) - T[265-451] 8.3E-59 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[267-451] 59.54 |
| PRINTS |
TF_T-box (IPR001699) - T[280-304] 1.1E-29 - T[350-363] 1.1E-29 - T[367-376] 1.1E-29 - T[387-401] 1.1E-29 - T[422-435] 1.1E-29 - T[443-451] 1.1E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX5_HUMAN | 44.503 % | 166 | 8.01E-44 |
| TBX21_HUMAN | 43 % | 168 | 1.14E-44 |
| TBR1_HUMAN | 44.792 % | 174 | 8.58E-46 |