Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R107.89431-101059.02589.t

Possible name(s)

COPS2; PSMD11

Gene model

Cisavi.CG.ENS81.R107.89431-101059

Location

R107 [89,577 / 100,690]

Sequences

Amino acid sequence

Length: 427

>Cisavi.CG.ENS81.R107.89431-101059.02589.p
DLTMAAAMEFDRAQSLSLSDQASAISAYKDILNRDIKSTDEEGLKLKEQSILKLGTLLQQ
QGHAEELGSLVKGVRPFLKSISKAKAAKLVRTLVDLFLDMEASTGLEVQLCLECIEWAKE
EKRTFLRQALEARLVALYFDTGRYQDALKSGSLLLRELKKLDDKQLLVEVQVTESRTYHA
LGNLQKAKAALTSARTTANSMYCPPKMQAALDRQSGILNAAEEKDWKTAYSYFYEAFEGY
DSIESNKAVSSLKYMLLCKIMLNQPDDVQSLLSGKLALKYAGRDIIAMRSVAKASHNRSI
SELQEILTQFEEELKADVIIGAHFDKLYDNLLEQNLLRVIEPFAKVQVSSCCFVLRVCMA
IWVTTVEKKLSQMILDKKFHGILSQGEGVLILFDESTADKTYETALEVISSMSLVVDSLY
QKAKRLT

Nucleotide sequence

Length: 1,333

>Cisavi.CG.ENS81.R107.89431-101059.02589.t
ACGTGTAAGAAAACCGTAGGATTTATTACGTTGAGTTTGTTTGGATGATGATCTGACGAT
GGCTGCAGCTATGGAATTCGACAGAGCTCAATCTTTAAGCTTGAGCGATCAGGCTTCGGC
TATAAGCGCTTACAAAGACATACTGAACCGGGATATTAAAAGCACTGATGAAGAAGGTTT
AAAGTTGAAGGAACAAAGTATTTTAAAGCTTGGAACTTTACTACAACAACAAGGCCATGC
TGAAGAACTTGGATCTCTGGTTAAAGGCGTACGTCCGTTTCTTAAATCAATCAGCAAAGC
AAAGGCAGCAAAACTTGTTCGCACTCTTGTTGATCTGTTTCTTGATATGGAAGCCAGCAC
TGGCCTTGAAGTCCAACTGTGCCTTGAATGCATAGAATGGGCCAAAGAAGAAAAGCGAAC
GTTTTTGCGACAAGCTTTGGAAGCCCGGCTTGTTGCTTTGTACTTTGATACCGGCAGGTA
CCAAGATGCACTGAAGTCTGGATCGCTGCTTCTGAGGGAGCTGAAGAAATTGGACGACAA
GCAATTGCTTGTTGAAGTGCAAGTGACAGAGTCCCGGACCTACCATGCACTGGGAAACCT
TCAGAAAGCGAAGGCCGCCCTCACATCAGCACGTACGACAGCGAACTCCATGTACTGCCC
ACCCAAGATGCAAGCTGCTCTCGACCGACAGTCCGGCATCCTTAATGCTGCGGAAGAGAA
AGATTGGAAAACCGCTTATTCCTACTTCTACGAAGCTTTTGAAGGATACGACTCGATTGA
AAGCAACAAGGCGGTTTCCTCGCTCAAGTACATGCTGCTGTGCAAGATCATGCTGAACCA
GCCTGATGACGTCCAGTCACTTCTCAGTGGTAAACTTGCGCTAAAATACGCAGGCAGAGA
CATAATTGCAATGAGAAGTGTGGCAAAGGCAAGCCACAATCGATCTATCTCAGAACTACA
AGAGATTTTAACTCAATTTGAAGAAGAATTAAAAGCGGACGTGATAATTGGAGCCCATTT
CGACAAGCTCTATGATAATCTCCTGGAGCAAAACCTTCTTCGAGTGATTGAACCTTTCGC
AAAAGTCCAAGTGAGTTCATGTTGTTTTGTACTTCGTGTCTGCATGGCCATATGGGTCAC
AACTGTTGAAAAAAAGTTATCCCAGATGATTTTGGACAAGAAATTCCATGGAATTTTATC
CCAAGGGGAGGGGGTGCTGATTTTATTTGATGAATCTACTGCAGACAAAACCTACGAGAC
TGCACTCGAAGTGATCAGCAGTATGTCCTTAGTTGTGGACTCGCTGTATCAGAAGGCCAA
GCGGCTGACATAA

InterProScan

PANTHER	PSMD11 (IPR035295) - T[5-427] 3.3E-196
Pfam	PCI_dom (IPR000717) - T[287-392] 8.9E-12
SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[317-402] 2.5E-9
SMART	PCI_dom (IPR000717) - T[322-409] 2.3E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PSD11_HUMAN	68.545 %	597	0
CSN2_HUMAN	27.049 %	78.6	8.19E-16