- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R107...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R107.917853-930309.04954.t
Possible name(s)
TGFB1; TGFB2; TGFB3
Gene model
Location
R107 [917,852 / 930,240]
Amino acid sequence
Length: 416
>Cisavi.CG.ENS81.R107.917853-930309.04954.p
SYTGLLAFFVVVFMTYAPRTLAGCGVNFDRMRKRRIEAIRGQILSKLGLTELPTREGSPA
EIPLEIEALYNRTRDFVLEQARQQREECLVPEETYYAEEVHTVYMKNAQPQSEVQPGFKL
SRGVSEFFDFDLTTMQVNPDSIVSATLRLYQVQNPGSRGGTRNQVELYQLSPPEKGGLTP
VKRFLDMKMMDVTRSGWQTFDVTSSVREWIQFPRKLFDLNVNVRTGCCVVFLGSKNFNLS
AVLNEGLELTIPCLGEDTFSGTQKRSNRGPRKTLDYNPHLVIMVRTPSGNSRATSSRKRR
KRALDADYCFNRNPSETNCCLRELYIDFRRDLGWDWVHAPTGYRANFCAGACPYLWSMDS
QHATILGLYRSMNPHASSAPCCTSKELDPLIIMYYRNNKFTVTKMSDMVLLSCKCS
Nucleotide sequence
Length: 1,251
>Cisavi.CG.ENS81.R107.917853-930309.04954.t
TCGTACACAGGACTTTTAGCTTTCTTTGTCGTTGTTTTTATGACGTATGCCCCACGGACA
CTGGCTGGGTGCGGGGTGAACTTTGATAGAATGCGAAAGCGTAGAATAGAAGCCATACGG
GGTCAGATATTAAGCAAACTTGGATTGACCGAGCTGCCGACAAGGGAAGGGTCTCCCGCC
GAAATTCCGCTCGAGATCGAGGCTTTGTACAACCGCACGCGGGACTTTGTGCTCGAGCAA
GCCCGCCAACAAAGGGAAGAATGCCTCGTTCCTGAGGAGACGTATTACGCCGAAGAGGTA
CACACGGTCTACATGAAAAACGCTCAACCACAATCAGAAGTACAACCCGGCTTCAAACTA
TCACGGGGTGTTTCCGAATTTTTCGATTTTGATTTGACAACAATGCAAGTAAACCCGGAT
TCGATTGTGTCGGCAACACTGCGTTTGTATCAAGTGCAGAACCCGGGAAGTCGCGGAGGC
ACCAGGAACCAGGTCGAGTTGTATCAGCTCTCACCACCAGAGAAAGGAGGCCTCACTCCG
GTCAAACGGTTCCTTGATATGAAGATGATGGATGTCACCAGGTCAGGGTGGCAGACCTTT
GACGTCACATCCTCCGTTAGGGAGTGGATTCAATTCCCACGTAAGTTATTTGACCTTAAT
GTCAATGTACGAACCGGATGTTGCGTTGTATTTCTTGGGTCTAAAAACTTCAATTTATCC
GCAGTTCTTAACGAAGGCTTGGAGCTCACAATACCCTGTCTTGGCGAAGATACTTTTTCA
GGCACCCAGAAGCGGTCGAACCGTGGACCTCGAAAGACGTTGGATTATAACCCCCATTTA
GTTATCATGGTACGTACCCCGTCGGGGAATTCCCGTGCCACCAGTAGCCGCAAGAGACGC
AAGAGAGCACTAGATGCCGATTATTGCTTTAACCGGAACCCATCAGAAACCAATTGCTGC
TTGCGGGAATTATACATTGATTTCCGGAGGGATTTAGGCTGGGACTGGGTCCATGCACCT
ACAGGATATCGAGCCAACTTTTGTGCAGGAGCGTGCCCTTACCTGTGGAGCATGGATAGT
CAGCATGCGACTATATTGGGGTTATACCGCAGCATGAACCCACATGCGTCATCTGCGCCA
TGCTGTACTTCCAAAGAACTTGACCCCCTCATAATAATGTATTACCGCAACAATAAGTTT
ACAGTCACGAAAATGTCCGACATGGTCCTGTTGTCTTGCAAATGTAGCTGA
| PIRSF |
TGF-beta (IPR016319) - T[1-416] 2.3E-99 |
| PANTHER |
TGF-beta-rel (IPR015615) - T[3-409] 2.7E-127 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[29-225] 6.3E-26 |
| PRINTS |
TGF-beta (IPR016319) - T[61-73] 4.2E-6 - T[160-174] 4.2E-6 - T[197-211] 4.2E-6 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[299-416] 34.29 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[303-416] 2.4E-35 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[311-415] 2.79E-31 |
| Pfam |
TGF-b_C (IPR001839) - T[318-415] 6.6E-23 |
| SMART |
TGF-b_C (IPR001839) - T[319-416] 1.9E-29 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[337-352] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TGFB3_HUMAN | 37.47 % | 262 | 7.69E-84 |
| TGFB2_HUMAN | 40.326 % | 295 | 7.86E-97 |
| TGFB1_HUMAN | 35.279 % | 208 | 2.05E-63 |