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- Transcript 'Cisavi.CG.ENS81.R107...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R107.917853-930309.04955.t
Possible name(s)
TGFB1; TGFB2; TGFB3
Gene model
Location
R107 [917,852 / 930,240]
Amino acid sequence
Length: 411
>Cisavi.CG.ENS81.R107.917853-930309.04955.p
SYTGLLAFFVVVFMTYAPRTLAGCGVNFDRMRKRRIEAIRGQILSKLGLTELPTREGSPA
EIPLEIEALYNRTRDFVLEQARQQREECLVPEETYYAEEVHTVYMKNAQPQSEVQPGFKL
SRGVSEFFDFDLTTMQVNPDSIVSATLRLYQVQNPGSRGGTRNQVELYQLSPPEKGGLTP
VKRFLDMKMMDVTRSGWQTFDVTSSVREWIQFPRKLFDLNVNCTCRHLRNSNYIAYGRTV
DLERRSAGIRTIQSRGDQDQETFTPELGREYNPHLVIMVRTPSGNSRATSSRKRRKRALD
ADYCFNRNPSETNCCLRELYIDFRRDLGWDWVHAPTGYRANFCAGACPYLWSMDSQHATI
LGLYRSMNPHASSAPCCTSKELDPLIIMYYRNNKFTVTKMSDMVLLSCKCS
Nucleotide sequence
Length: 1,236
>Cisavi.CG.ENS81.R107.917853-930309.04955.t
TCGTACACAGGACTTTTAGCTTTCTTTGTCGTTGTTTTTATGACGTATGCCCCACGGACA
CTGGCTGGGTGCGGGGTGAACTTTGATAGAATGCGAAAGCGTAGAATAGAAGCCATACGG
GGTCAGATATTAAGCAAACTTGGATTGACCGAGCTGCCGACAAGGGAAGGGTCTCCCGCC
GAAATTCCGCTCGAGATCGAGGCTTTGTACAACCGCACGCGGGACTTTGTGCTCGAGCAA
GCCCGCCAACAAAGGGAAGAATGCCTCGTTCCTGAGGAGACGTATTACGCCGAAGAGGTA
CACACGGTCTACATGAAAAACGCTCAACCACAATCAGAAGTACAACCCGGCTTCAAACTA
TCACGGGGTGTTTCCGAATTTTTCGATTTTGATTTGACAACAATGCAAGTAAACCCGGAT
TCGATTGTGTCGGCAACACTGCGTTTGTATCAAGTGCAGAACCCGGGAAGTCGCGGAGGC
ACCAGGAACCAGGTCGAGTTGTATCAGCTCTCACCACCAGAGAAAGGAGGCCTCACTCCG
GTCAAACGGTTCCTTGATATGAAGATGATGGATGTCACCAGGTCAGGGTGGCAGACCTTT
GACGTCACATCCTCCGTTAGGGAGTGGATTCAATTCCCACGTAAGTTATTTGACCTTAAT
GTCAATTGTACTTGTCGGCACTTACGAAATAGTAATTATATAGCATACGGTCGAACCGTG
GACCTCGAAAGACGATCTGCTGGTATTCGAACTATTCAAAGCCGAGGGGACCAAGACCAG
GAAACGTTTACCCCTGAACTTGGAAGGGAGTATAACCCCCATTTAGTTATCATGGTACGT
ACCCCGTCGGGGAATTCCCGTGCCACCAGTAGCCGCAAGAGACGCAAGAGAGCACTAGAT
GCCGATTATTGCTTTAACCGGAACCCATCAGAAACCAATTGCTGCTTGCGGGAATTATAC
ATTGATTTCCGGAGGGATTTAGGCTGGGACTGGGTCCATGCACCTACAGGATATCGAGCC
AACTTTTGTGCAGGAGCGTGCCCTTACCTGTGGAGCATGGATAGTCAGCATGCGACTATA
TTGGGGTTATACCGCAGCATGAACCCACATGCGTCATCTGCGCCATGCTGTACTTCCAAA
GAACTTGACCCCCTCATAATAATGTATTACCGCAACAATAAGTTTACAGTCACGAAAATG
TCCGACATGGTCCTGTTGTCTTGCAAATGTAGCTGA
| PIRSF |
TGF-beta (IPR016319) - T[1-411] 2.5E-100 |
| PANTHER |
TGF-beta-rel (IPR015615) - T[3-404] 2.1E-132 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[29-260] 8.3E-27 |
| PRINTS |
TGF-beta (IPR016319) - T[61-73] 4.1E-6 - T[160-174] 4.1E-6 - T[197-211] 4.1E-6 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[294-411] 34.29 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[298-411] 2.3E-35 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[306-410] 2.75E-31 |
| Pfam |
TGF-b_C (IPR001839) - T[313-410] 6.4E-23 |
| SMART |
TGF-b_C (IPR001839) - T[314-411] 1.9E-29 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[332-347] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TGFB3_HUMAN | 37.292 % | 263 | 2.55E-84 |
| TGFB2_HUMAN | 41.176 % | 301 | 3.16E-99 |
| TGFB1_HUMAN | 36.667 % | 215 | 3.67E-66 |