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TRANSCRIPT CARD

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  1. Clone 'cien99241'
  2. Transcript 'Cisavi.CG.ENS81.R11....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R11.207906-212165.04789.t

Possible name(s)

HSP90AA1; HSP90AB1; HSP90B1

Location

R11 [208,011 / 212,142]

Sequences

Amino acid sequence

Length: 686

>Cisavi.CG.ENS81.R11.207906-212165.04789.p
QDDVAEVFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS
GKELKIEIIPNKDDHTLTLIDTGVGMTKSDLINNLGTIAKSGTKAFMEALQSGADISMIG
QFGVGFYSAFLVADKVKVVSKHNDDEQYVWESSAGGSFTVSNVVDDVPVRGTKIVLYMKE
DQREYLEEKKIKDIVKKHSQFIGYPISLHVEKEREKEISDDEEEEEEKKEEAAEEKYTEL
EELNKTKPLWTRNPDDISQDEYGEFYKSLSNDWEDHLAVKHFSVEGQLEFRALLFVPKRA
PFDLFENRKLKNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISRETLQQSK
ILKVIRKNIVKKCVELIGEIVEDKEQYKKFYEQFGKNLKLGIHEDSQNRKKLAGFLQYHS
SQSGDEMTTLENYVTRMKENQKDIYYITGESRDQVSNSAFVERVTKRGFEVLYMVEPIDE
YCVQQLKEFDGKNLVSITKEGLELPEDEDEKKKLEEAKAKFENLCKVIKEILDKKVEKVV
VSNRLVQSPCCIVTSQYGWSANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIMEQLR
QKAEADKNDKSVKDLVMLLYETSLLASGFSLEDPSTHATRIHRMIKLGLGIDDVDGEDAA
TGDDVDDMPPLEGDADDDASRMEEVD

Nucleotide sequence

Length: 2,251

>Cisavi.CG.ENS81.R11.207906-212165.04789.t
CAAGATGATGTTGCGGAGGTGTTTGCTTTCCAAGCTGAAATTGCTCAGTTAATGAGCTTG
ATTATCAATACCTTCTACAGCAACAAAGAAATCTTCTTAAGAGAATTGATTTCAAACTCT
TCTGATGCCCTCGATAAAATTCGGTATGAAAGTTTAACCGATCCAAGCAAGCTTGACAGC
GGAAAAGAATTGAAAATTGAAATCATCCCAAATAAGGATGACCATACCCTCACCTTGATT
GATACTGGTGTAGGAATGACAAAATCTGATCTGATCAACAATCTAGGGACAATTGCAAAA
TCTGGAACAAAAGCTTTTATGGAAGCTCTTCAGTCGGGTGCTGATATTTCTATGATTGGT
CAATTTGGTGTCGGTTTCTACTCTGCATTTTTGGTAGCAGACAAAGTTAAAGTGGTTTCA
AAGCACAACGATGATGAACAATATGTGTGGGAATCTTCCGCTGGTGGCTCCTTTACAGTT
TCCAATGTAGTTGATGATGTTCCAGTCCGTGGTACCAAGATCGTTCTTTATATGAAGGAA
GATCAACGCGAGTACTTGGAGGAAAAGAAGATCAAGGACATCGTTAAGAAGCACAGCCAG
TTTATTGGTTATCCAATCTCCCTTCATGTGGAGAAGGAGCGGGAAAAGGAAATCAGTGAT
GACGAGGAGGAGGAAGAAGAGAAGAAAGAGGAAGCTGCCGAGGAGAAATACACTGAGCTT
GAAGAGCTGAACAAAACGAAGCCACTGTGGACCAGAAACCCTGATGATATTTCACAAGAT
GAATACGGAGAGTTCTACAAAAGTTTGTCTAATGACTGGGAAGACCATCTTGCTGTTAAG
CACTTCTCTGTAGAAGGACAGTTGGAGTTCCGTGCCTTGCTCTTTGTTCCAAAGCGTGCT
CCTTTTGACTTGTTCGAAAATCGGAAGCTTAAGAACAACATTAAGCTTTATGTCAGGAGA
GTATTCATCATGGACAACTGTGAGGATCTCATTCCAGAGTACCTAAATTTCGTGAAGGGA
GTGGTGGATAGTGAAGATCTTCCTTTAAACATCTCTCGTGAAACTCTTCAACAATCAAAG
ATTCTCAAAGTCATTCGAAAGAACATTGTAAAGAAATGTGTTGAATTAATTGGCGAGATT
GTAGAAGACAAGGAACAATACAAGAAATTTTATGAACAATTCGGAAAGAACCTGAAGCTG
GGTATTCATGAGGATTCTCAAAATCGCAAGAAATTGGCTGGATTCCTTCAATACCACTCA
TCGCAATCTGGTGATGAAATGACAACTTTGGAAAACTACGTCACTCGAATGAAGGAAAAC
CAGAAGGACATTTATTACATTACTGGTGAATCCAGAGACCAGGTCTCCAACTCTGCTTTT
GTTGAAAGAGTCACAAAAAGAGGGTTTGAAGTCTTGTACATGGTTGAGCCCATTGATGAA
TATTGTGTACAACAACTCAAGGAGTTCGATGGGAAGAATTTGGTCTCCATTACAAAAGAA
GGTCTTGAACTTCCAGAGGATGAAGATGAGAAGAAAAAGTTGGAAGAAGCAAAGGCTAAA
TTTGAAAACCTTTGCAAAGTTATCAAGGAGATTCTTGACAAAAAAGTGGAGAAGGTTGTG
GTATCAAATAGACTGGTGCAGTCCCCGTGTTGTATTGTGACCTCCCAGTATGGTTGGTCT
GCCAACATGGAACGAATCATGAAAGCCCAAGCATTAAGAGACACCTCCACTATGGGTTAT
ATGGCCGCTAAGAAACACCTGGAAATTAATCCAGATCATTCAATCATGGAGCAACTTCGA
CAAAAGGCAGAGGCCGACAAGAATGACAAGTCTGTAAAAGATCTCGTTATGCTTTTGTAT
GAAACTTCCCTGCTGGCTTCTGGCTTCTCACTGGAAGATCCATCAACCCATGCCACCCGA
ATTCATAGAATGATCAAGCTCGGTTTAGGTATTGATGATGTTGATGGAGAGGACGCAGCC
ACCGGCGACGATGTTGATGATATGCCGCCACTGGAGGGTGATGCTGATGACGATGCATCT
CGCATGGAAGAAGTTGATTAAACCTATTAGTCGAAAGGTTGCCAAACCAATTTTTCCATC
TTTCGGATTCGGCACACAATGCAGCTAGAGTGTAAAAATCGGTTCAGCACTCTTGTTCAA
TTTTTAGTTACCGTCACATCCGTGTGAAACTCCTGTTCAATATTTCTTTTCTGCTGTTAC
GCTATAAATTGTCCCGTTTTGTAATTGTATC

InterProScan

PANTHER
Hsp90_fam (IPR001404) - T[2-223] 0.0 - T[224-686] 0.0
PIRSF
Hsp90_fam (IPR001404) - T[2-686] 1.3E-254
Hamap
Hsp90_fam (IPR001404) - T[3-646] 26.933
PRINTS
Hsp90_N (IPR020575) - T[6-26] 4.2E-83 - T[27-49] 4.2E-83 - T[76-93] 4.2E-83 - T[94-111] 4.2E-83 - T[119-141] 4.2E-83 - T[170-187] 4.2E-83 - T[188-206] 4.2E-83
SUPERFAMILY
HATPase_C_sf (IPR036890) - T[6-214] 4.35E-71
Gene3D
HATPase_C_sf (IPR036890) - T[6-210] 1.5E-101
ProSitePatterns
Heat_shock_protein_90_CS (IPR019805) - T[26-35] .
SMART
HATPase_C (IPR003594) - T[28-182] 1.3E-7
Pfam
HATPase_C (IPR003594) - T[28-181] 2.2E-12
CDD
HATPase_C (IPR003594) - T[30-177] 6.73604E-8
Pfam
Hsp90_fam (IPR001404) - T[184-659] 6.4E-226
SUPERFAMILY
Ribosomal_S5_D2-typ_fold (IPR020568) - T[245-500] 1.97E-108
Gene3D
HSP90_C (IPR037196) - T[501-649] 1.8E-68
SUPERFAMILY
HSP90_C (IPR037196) - T[523-645] 2.88E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HS90A_HUMAN 76.87 % 1072 0
HS90B_HUMAN 75.838 % 1051 0
H90B3_HUMAN 60.94 % 693 0