- Molecular Tool 'cieg43h01-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.L4.29.v2.C...' >
- Transcript 'KH2012:KH.L4.29.v2.C...' >
- Transcript 'Cisavi.CG.ENS81.R112...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R112.371448-383325.08695.t
Possible name(s)
CLPX; KATNA1; PSMC5
Gene model
Location
R112 [371,810 / 383,225]
Amino acid sequence
Length: 520
>Cisavi.CG.ENS81.R112.371448-383325.08695.p
GSSGDKNTVGGGKSGGRKRGNGGNQFTGIICPNCGSPCIKTDVVASSKFIRCSNSDCSNL
FTMESQPQAQPTPTHTESMWDQKPPPPPKKICEFLDKYVVGQSHAKKVLSVAVYNHYKRI
FKNLPLTKPTPAPEPEGFCITPMIIDPSTTDVLHIAGVPHKTGVRPREEEKSDVAKMNLD
DERSQITLEKSNILMLGPTGSGKMRHHWCVSQPLCKTLLAQTLARCLDVPFAICDCTTLT
QAGYVGEDIESVIAKLLQDAGGHVERAEKGIVFLDEVDKISSVPGIHQLRDVGGEGVQQG
LLKMLEGTVVNVPERNSRKLRGDSVVVDTTNILFVASGAFNGLEKFISRRMNEKSLGFSQ
HTQTSSRPKVKQQMMGFEQNPLKSAIEENKERDEFLKHTEASDLVGFGMIPEFVGRLPIT
VPLHSLSNEHLTKILTEPRNAVVPQFEALFNMDKSDLAITPAALRAIADLALERKTGARG
LRSIMEQLLLDPMYDVPGSDIIGVCIDEDVVKEKKKAHYI
Nucleotide sequence
Length: 1,880
>Cisavi.CG.ENS81.R112.371448-383325.08695.t
CTCGTTGTGGATCCTCCGCTTTGCATTCCCGGATAAAAACATTTGTTTCGCCGATCTCCA
ATTTACCACATAAACTTTTATCAAAAGAGCAGTTTCGTTTGCCCAAGCGGAGATATTCGA
ACCAAGACAGCGCAATATTTCGGTCAAATGATTTTATCGATAATCCAACCTCGTTTTTGA
ATCAACCTGTTTATGTGTATTGTTCTAACAACTATGCAACGATGTGTGAGGGAAGGAGGG
GGCTGGGTATTTTAGGGAAAGTCCCAGACAAGAGTGGGTCTGGGAACCTGATTGGTCGAG
GGACAGGGGGAGGGGCATCAGGCAGTTCTGGTGATAAGAACACGGTCGGCGGGGGAAAAA
GTGGAGGCAGAAAGAGGGGAAACGGTGGGAACCAATTTACTGGAATCATCTGTCCAAACT
GTGGGAGTCCCTGTATTAAAACAGATGTTGTTGCGTCGTCGAAGTTTATCCGATGCTCCA
ACTCCGATTGCAGCAACTTGTTCACCATGGAAAGTCAGCCGCAAGCCCAGCCCACCCCAA
CACATACGGAATCCATGTGGGACCAAAAACCCCCTCCACCACCAAAAAAGATCTGTGAAT
TCCTTGATAAATATGTGGTTGGTCAAAGTCACGCGAAAAAGGTTCTTTCGGTCGCAGTGT
ATAACCACTACAAGCGGATATTTAAGAACCTACCACTAACAAAGCCAACCCCTGCACCAG
AGCCTGAAGGTTTCTGCATAACTCCAATGATTATTGACCCTTCTACCACAGACGTCCTGC
ATATCGCGGGGGTTCCCCATAAAACCGGGGTCCGACCCCGTGAGGAGGAGAAAAGTGATG
TTGCGAAGATGAACCTCGATGACGAGCGATCCCAGATCACGCTCGAGAAGAGCAACATCC
TCATGCTCGGACCTACTGGATCCGGTAAGATGCGACATCATTGGTGTGTTTCCCAACCTT
TATGCAAGACACTTCTGGCCCAGACTCTAGCCCGTTGTCTGGACGTCCCGTTCGCGATAT
GCGATTGCACCACCCTCACCCAGGCGGGTTACGTGGGCGAGGACATCGAATCGGTGATCG
CGAAGTTGCTGCAAGACGCAGGAGGGCATGTTGAACGCGCAGAGAAAGGTATCGTGTTCC
TTGATGAAGTGGATAAGATCAGTAGTGTCCCGGGGATTCACCAGTTGCGAGACGTCGGGG
GTGAGGGTGTTCAACAGGGATTGTTGAAAATGCTTGAAGGGACAGTGGTGAATGTTCCGG
AACGCAATTCCCGCAAATTACGGGGCGATTCGGTCGTAGTGGACACCACGAATATATTGT
TCGTTGCATCCGGTGCTTTCAATGGGTTGGAGAAGTTTATCTCTCGACGGATGAACGAGA
AGTCGCTTGGATTCAGCCAACACACGCAGACGAGCAGCCGACCGAAAGTCAAACAGCAGA
TGATGGGGTTCGAACAAAACCCCCTCAAGTCCGCAATCGAGGAAAATAAGGAACGCGACG
AGTTTTTGAAACACACAGAGGCAAGTGACCTGGTCGGCTTTGGAATGATCCCAGAGTTTG
TCGGTCGCCTCCCAATAACCGTTCCGTTGCACAGTTTGTCCAACGAACATCTCACGAAGA
TTCTCACCGAACCGCGTAACGCAGTCGTCCCACAATTCGAGGCGCTGTTCAACATGGACA
AATCTGACCTCGCGATCACTCCAGCCGCATTACGAGCGATCGCCGATCTTGCTCTGGAAC
GTAAGACTGGAGCCCGTGGACTGCGATCTATCATGGAGCAACTTTTATTGGACCCCATGT
ATGACGTACCCGGAAGTGACATCATCGGGGTATGTATCGACGAGGACGTAGTCAAAGAGA
AGAAAAAGGCTCACTACATC
| PANTHER |
Clp_protease_ATP-bd_su_ClpX (IPR004487) - T[30-520] 3.9E-172 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[86-119] 2.16E-53 - T[183-513] 2.16E-53 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[189-419] 1.8E-37 |
| ProSitePatterns |
Sigma_54_int_dom_ATP-bd_2 (IPR025943) - T[262-277] . |
| SMART |
Clp_ATPase_C (IPR019489) - T[426-520] 2.7E-26 |
| Pfam |
Clp_ATPase_C (IPR019489) - T[426-497] 7.6E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLPX_HUMAN | 55.985 % | 515 | 2.47E-178 |