- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- EST 'AHC0AAA224YO11_RM1' >
- Transcript 'KH2012:KH.L119.8.v2....' >
- Transcript 'Cisavi.CG.ENS81.R113...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R113.258391-266589.05447.t
Possible name(s)
NCL; RBM34; SART3
Gene model
Location
R113 [258,390 / 261,972]
Amino acid sequence
Length: 340
>Cisavi.CG.ENS81.R113.258391-266589.05447.p
MMFTELPEGLNDTVFNKFLKSKGIQCVACRANYGRQKAFVDIKKDDQGIALGLHQVEWKG
HEISVTEAVSKREERKSGDFGGNRNDKDERTLFIKNLPYSAHEDSIGELFEGVKEVRILK
DRESGRSKGMAFIEFNSTGEKETAFGLKDELELDGRSLYLDTVNGGGGGRGGGRGGGRGR
GGRDFGRGGGGGFGRGGGRGRGPSTPSKTLFVKGITEGMTKDSLFETFSNAQDIRIPQDR
ENGGNKPFAYVEFDSESSATSVYKNAKGGMHVDGAKLFVDYAAERSNDGGRGGGRGGRGG
GFRGRGGRGGFGGTPRGGAAKHKGSIQAFEGKRTKFNDSD
Nucleotide sequence
Length: 1,703
>Cisavi.CG.ENS81.R113.258391-266589.05447.t
AGGTAAAGGCAGCTGCTAAAGATGAATCCGACGATGAAGATGAAGATGAAGATGATGATG
ATGATGATTCAGAAGATGAAACGGATGCAAAAAAATCGAAAACTGAAAAAGACAGCGATG
ACGATGATGATGAAAGTGGTGACGAGGGTGAAAGTGAAGACGATGATGATGAAAGTGCAC
AAAAGTCTTCAAAGAGAAAAGCACCAGCTGCCACTGAAGAGGCCAAAAAAGCTAAAGTCG
ATTCATCTGAAATTGTTACAATGATGTTTACTGAGCTACCAGAGGGATTGAATGATACAG
TTTTTAACAAGTTCCTAAAAAGCAAAGGAATTCAATGTGTTGCGTGTCGTGCAAACTATG
GAAGACAAAAAGCGTTTGTCGACATCAAAAAAGATGACCAGGGTATTGCACTTGGTCTCC
ACCAAGTTGAATGGAAGGGACACGAGATCAGCGTAACTGAAGCGGTGTCTAAAAGAGAAG
AAAGAAAAAGTGGTGATTTTGGCGGCAATCGAAATGACAAGGATGAGCGAACATTGTTCA
TCAAGAATCTTCCGTACAGTGCACACGAGGACTCCATTGGTGAACTATTCGAAGGCGTGA
AAGAAGTTCGTATTCTTAAGGATCGAGAGAGCGGAAGATCTAAAGGAATGGCTTTTATCG
AGTTTAACTCAACCGGTGAAAAGGAGACTGCGTTTGGATTGAAAGACGAACTCGAGTTGG
ATGGGAGGTCATTGTATCTGGACACAGTGAACGGAGGTGGGGGTGGCAGAGGAGGCGGAA
GAGGGGGAGGGAGAGGTCGTGGAGGACGAGACTTCGGCAGAGGTGGAGGTGGAGGATTCG
GGAGAGGAGGTGGTCGGGGCAGAGGACCATCTACCCCGAGCAAAACGCTTTTTGTGAAGG
GGATCACAGAAGGGATGACCAAGGATTCCCTTTTTGAAACTTTCTCAAATGCACAAGACA
TACGAATACCGCAAGATCGGGAGAATGGTGGAAATAAACCGTTCGCATACGTGGAGTTCG
ATTCTGAGAGCTCGGCCACTTCGGTGTACAAGAACGCGAAAGGTGGAATGCATGTTGATG
GGGCCAAGTTGTTTGTGGACTACGCTGCTGAACGTAGCAACGATGGTGGGCGAGGAGGCG
GACGTGGCGGACGCGGCGGAGGCTTCAGAGGTCGAGGTGGCCGAGGAGGCTTCGGGGGAA
CCCCGAGAGGTGGCGCTGCTAAACACAAGGGATCCATACAAGCGTTCGAAGGCAAAAGAA
CCAAATTCAACGATTCCGACTGATCATTTACCACCGTGACGTCCCTAACAATCACTATGG
GCGTCCACTCACACAGTTTATTGCCGACGTAAACAATTTAATGGTTCCCTCTGGTCAAGG
TTTTGTTTCGTGTAGAAGTTGGCAGCATAAGCGCGACTTGAGATCGTGATTTCAAGTAAT
CACGTCTTTACTTTTTGAAGTTTCTTAGCATTTGGGTGGAATCGTCGTTTTTGTTTTTCT
TTTTTTGCCACCTGCTTCGTAAAACTCACTGCCACCGTTGGCTGTGTTATTTTGATTTAA
AAGTAACATAATTTTAAGTGGTTTTTAAAAGTACACCATTTTGCTTTTCGATATTTTAAA
CTTGACGGCGTAAAAACTGAAATGTCGTTAACCGTTGCAGCCGCAAGTTGGCGCAACTGA
TCAATAAATTACTTTGAACCAAG
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[16-85] 1.3E-18 - T[86-138] 1.3E-18 - T[139-158] 1.3E-18 - T[199-319] 4.5E-19 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[85-197] 7.25E-23 - T[204-313] 1.61E-22 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[90-165] 15.221 - T[208-284] 13.72 |
| SMART |
RRM_dom (IPR000504) - T[91-161] 3.8E-14 - T[209-280] 1.1E-12 |
| Pfam |
RRM_dom (IPR000504) - T[92-158] 1.3E-10 - T[210-273] 4.5E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NUCL_HUMAN | 33.333 % | 97.8 | 2.36E-22 |