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TRANSCRIPT CARD

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  1. EST 'FF947706.1' > 
  2. Clone 'cigd001p21' > 
  3. Transcript 'Cisavi.CG.ENS81.R117...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R117.973165-976478.13889.t

Possible name(s)

PABPC1L2A; TIA1; TIAL1

Gene model

Cisavi.CG.ENS81.R117.973165-976478

Location

R117 [973,164 / 976,478]

Sequences

Amino acid sequence

Length: 215

>Cisavi.CG.ENS81.R117.973165-976478.13889.p
MSGLTEQIMRETFAGFGNILEIRVFPDKGYSFIRFDNHTDAAQAITSKHGATIEGYTVKC
SWGKEGAGLGSSNIGSNFTNGVGGMDNMQMNQWSPAGADMWGVNQQQQQSQQYNQWTTWR
NPTNQQQPQNSWNAWAPNQMSNNTWAPPNQMGSNNTWTPNTTTQQNMSGQGNSWGWPSMG
GHQNAGDAWGSNGGQERMWNNWEHPGFWKFDRQSC

Nucleotide sequence

Length: 1,128

>Cisavi.CG.ENS81.R117.973165-976478.13889.t
TTCAAAAGCTGGAATTCTCCAACGTGGTCAACCAGTCAAGCAACACCAACTGCACTGTTT
ACCTCGGTGGCTGTATGTCTGGCCTTACAGAGCAAATAATGCGAGAGACTTTTGCTGGAT
TTGGAAATATTCTTGAAATTCGGGTTTTCCCCGACAAAGGCTATTCTTTCATTAGGTTCG
ACAATCATACAGATGCCGCTCAAGCAATCACATCCAAGCACGGGGCAACAATTGAAGGTT
ACACAGTTAAATGCTCATGGGGAAAGGAGGGGGCTGGGCTCGGCAGCTCAAACATTGGAA
GCAACTTCACCAACGGGGTCGGGGGTATGGACAACATGCAAATGAACCAATGGTCACCTG
CAGGTGCGGATATGTGGGGAGTGAACCAGCAACAGCAGCAATCTCAACAATACAACCAAT
GGACCACATGGAGGAACCCCACAAACCAGCAGCAACCCCAAAACTCTTGGAATGCTTGGG
CACCAAACCAGATGTCAAACAATACTTGGGCCCCGCCCAACCAAATGGGTTCAAACAACA
CCTGGACACCAAACACCACCACGCAGCAGAATATGTCTGGGCAAGGAAACTCATGGGGCT
GGCCAAGTATGGGGGGTCACCAAAATGCAGGAGATGCATGGGGATCGAATGGTGGCCAAG
AAAGAATGTGGAATAACTGGGAACACCCAGGGTTTTGGAAATTTGACCGGCAATCCTGCT
GAGGGGCAGGCAAACGGGGCATCGGGAGCAGGGGACCAATCCACAGCTAATCCCATTGCA
TCCCAGGCCACTAATGGATTCGGAATTTAAGCTTTCTATCTAATTCACCACCTGTCCTAT
TAAATTCCTGTCTCATTTGTTTGTAAATTTAATTTTGTTTTATGTAAATCGTTATTTAGC
TAGTTTAGCGATTAGCGATAGACCCCATGTACCCTTTGCTTGCAAGCTCGTTTAGTTTTC
TGGATGATAATTCTGCTTTTACCCACTTTAGTAATCCTTAAAACACCTATACCAAAAGCA
TATAATGGTGCTACGCATTACGGGCTTGTGTATCTTCTAACAGTACATGTAGTCATTATT
ATTCTTATAAACCTATATTAACTTTGTGGAAATTATTTGTACATATAA

InterProScan

ProSiteProfiles
RRM_dom (IPR000504) - T[1-65] 13.243
SMART
RRM_dom (IPR000504) - T[1-61] 2.2E-6
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[2-68] 9.2E-16
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[3-66] 1.88E-16
Pfam
RRM_dom (IPR000504) - T[4-59] 3.1E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TIAR_HUMAN 54.839 % 100 3.99E-25
TIA1_HUMAN 70.312 % 104 1.78E-26