Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R1.239697-241358.02877.t

Possible name(s)

FCN2; FIBCD1; TNR

Gene model

Cisavi.CG.ENS81.R1.239697-241358

Location

R1 [240,316 / 241,358]

Sequences

Amino acid sequence

Length: 209

>Cisavi.CG.ENS81.R1.239697-241358.02877.p
LTTDCKVAQYAGNNVSGIYNITRHGNIFQVFCDMKTDEGGWTVFQRRIIGEQDFFLNWDE
YRRGFGNINKEFWIGLDDLHSLTSHGNFELRIDLKDCENRTQYAKYRLNISLPAVGIFVI
VLIYDKTGMRDSLSYHNGRPFSTKDQDNDSHSSSNCAVTYQGGWWNGACHDSNLNGPYLP
CVNTPISMNWHNGTGHFGYRFSEMKFRPY

Nucleotide sequence

Length: 630

>Cisavi.CG.ENS81.R1.239697-241358.02877.t
TTAACAACCGATTGTAAGGTTGCTCAATATGCTGGAAACAATGTAAGTGGAATCTACAAC
ATAACAAGGCACGGGAACATATTCCAAGTATTCTGCGACATGAAGACGGACGAAGGCGGA
TGGACGGTTTTTCAGCGAAGAATCATCGGAGAGCAGGACTTCTTTCTTAACTGGGATGAA
TATCGTCGAGGATTTGGTAACATAAACAAAGAATTTTGGATAGGTTTAGACGATTTACAT
TCGCTGACATCACATGGGAATTTCGAGTTGAGAATTGATTTAAAAGATTGTGAGAATCGG
ACACAATACGCAAAATATCGATTAAATATATCTTTACCAGCTGTGGGTATATTCGTAATT
GTGTTAATTTACGACAAAACAGGCATGAGAGATTCTCTAAGTTACCATAATGGACGACCG
TTTTCCACAAAAGATCAGGACAACGACTCCCACTCAAGTTCAAACTGCGCAGTAACATAC
CAAGGAGGGTGGTGGAACGGTGCATGCCATGACTCAAATCTCAACGGACCATATCTGCCT
TGTGTTAACACGCCCATATCCATGAATTGGCATAACGGAACCGGGCATTTTGGATATCGG
TTTTCTGAAATGAAGTTTCGACCTTACTGA

InterProScan

SMART	Fibrinogen_a/b/g_C_dom (IPR002181) - T[1-209] 3.0E-63
ProSiteProfiles	Fibrinogen_a/b/g_C_dom (IPR002181) - T[1-209] 47.524
Gene3D	Fibrinogen_a/b/g_C_1 (IPR014716) - T[1-110] 2.2E-42
CDD	Fibrinogen_a/b/g_C_dom (IPR002181) - T[3-208] 8.15852E-79
Pfam	Fibrinogen_a/b/g_C_dom (IPR002181) - T[3-209] 3.9E-51
SUPERFAMILY	Fibrinogen-like_C (IPR036056) - T[3-208] 1.57E-63
Gene3D	Fibrinogen_a/b/g_C_2 (IPR014715) - T[130-200] 1.6E-22

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TENR_HUMAN	45.498 %	192	1.5E-56
FCN2_HUMAN	47.027 %	169	7.52E-52
FBCD1_HUMAN	43.379 %	169	2.27E-50