Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R1.2430970-2434090.17104.t

Possible name(s)

JMJD4; JMJD6; JMJD8

Gene model

Cisavi.CG.ENS81.R1.2430970-2434090

Location

R1 [2,430,969 / 2,434,090]

Sequences

Amino acid sequence

Length: 389

>Cisavi.CG.ENS81.R1.2430970-2434090.17104.p
MSDHKSRKRIRAAKKAARPELKGEDGWRGHKYQEWFDTSISAVSDNVLRVDAEKLSCVKT
LLHKYERPNVPIVLLNTQNSWLANQKWTLERLKKKYRNQKFKCGEDNDGYSVKMKMKYYI
DYMKTTRDDSPLYIFDSNYGEHNKRKQLLEDFEIPKYFKDDLFRYSGEKKRPPYRWFVMG
PRLSGTGIHIDPLGTSAWNALVSGHKRWCMFPNKTPKDLIKVKRSEGLLQQDEAITWFQI
VYPRTKSKDWPQEFKPLEILQKPGETVFVPGGWWHLVLNLDTTIAVTQNFASVTNFPTVW
PKTVKGRPKLSRKWIRILRKERPEVAAITDKISTDDYVSSDSSSDSSSSSSDSSSSSSED
EKESRKRTMPSVTANGVSYPGKRQRSEQK

Nucleotide sequence

Length: 1,440

>Cisavi.CG.ENS81.R1.2430970-2434090.17104.t
TGGTTGTAAAACAGGTGGTGTAGTGTTGTAAATGCAGTAATAGTAAAGCCATTTTTGGTT
TGTTTGGTTATAATCGAATGGTATAGTCTACTGGTAATAAAAAGTTTTTCGATTTGTTGC
GACACATTTTCATCCTTTTAATGTCTGATCACAAATCTAGAAAGAGGATTAGAGCTGCTA
AAAAAGCAGCAAGGCCAGAGCTAAAGGGCGAAGATGGATGGAGGGGACATAAATACCAAG
AATGGTTTGACACTTCTATTTCTGCTGTTTCAGACAACGTTCTCAGAGTTGATGCAGAAA
AGTTATCATGTGTGAAGACTTTATTGCACAAATATGAACGACCAAACGTACCCATTGTAT
TATTGAACACACAAAACTCATGGCTTGCAAACCAAAAGTGGACTTTGGAAAGATTAAAGA
AAAAATATCGCAACCAAAAGTTCAAGTGTGGGGAGGACAATGACGGTTATTCTGTAAAAA
TGAAAATGAAGTATTACATCGATTACATGAAGACCACAAGAGATGACAGCCCACTTTATA
TCTTTGATAGCAACTATGGTGAACACAATAAACGGAAGCAACTTCTAGAAGATTTTGAAA
TTCCAAAATATTTCAAAGATGATTTATTTAGGTATTCAGGAGAGAAGAAAAGGCCTCCAT
ACAGATGGTTTGTTATGGGACCCCGCTTATCAGGAACAGGTATTCACATAGATCCTTTAG
GAACAAGTGCTTGGAATGCACTTGTGAGTGGCCACAAAAGATGGTGCATGTTTCCCAACA
AAACCCCCAAAGACCTGATCAAGGTGAAGCGTAGTGAAGGATTATTACAGCAAGATGAAG
CTATCACTTGGTTCCAAATTGTGTACCCCCGCACCAAATCAAAAGATTGGCCACAGGAAT
TCAAGCCTTTAGAAATCTTACAAAAGCCAGGTGAGACTGTGTTTGTACCTGGTGGTTGGT
GGCATCTTGTTCTTAACCTCGACACAACAATTGCCGTTACACAAAACTTTGCCTCAGTCA
CCAACTTCCCCACAGTTTGGCCAAAAACAGTTAAAGGAAGGCCAAAGCTATCTCGTAAAT
GGATTCGGATTTTAAGAAAAGAACGGCCGGAGGTGGCTGCGATTACTGATAAGATCTCAA
CCGATGATTACGTGAGTTCCGACTCTTCATCAGATTCCTCCTCATCCTCCAGCGACTCCT
CATCAAGCTCCTCTGAGGATGAGAAAGAATCTCGAAAACGTACAATGCCATCTGTCACCG
CTAATGGAGTTTCCTACCCAGGAAAACGTCAACGATCCGAGCAAAAATAGAAACGTCGAT
AAATTTTATCTATGGCCCATTACATCTGCTTCACTAGCATACTGCCGCTTTGTAATTGCA
AGATTTCTGTGAATTATGCAATAGTCCACTTGTGAATAAATTATGCTTTCCTTAACAAGA

InterProScan

ProSiteProfiles	JmjC_dom (IPR003347) - T[143-307] 35.559
SMART	JmjC_dom (IPR003347) - T[143-307] 8.8E-38
Pfam	JmjC_dom (IPR003347) - T[176-290] 3.3E-24

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
JMJD6_HUMAN	72.424 %	519	0