Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 635

>Cisavi.CG.ENS81.R1.2477029-2488559.17166.p
MKTAKGKAQIEIIPCKVCGDKSSGIHYGVITCEGCKGFFRRSQQNNYAYSCPRHGNCIID
RSNRNRCQHCRLQKCLRAGMSKDAVKFGRMSKKQRDRLYLEVLKQQQLRSGQPQPESEAF
NQTKHSAVTHSPPTETNVTSYFTTAEQRNDVMVKLEPSNENTFNPNHDPLTPPTVQPVPM
ESKAAEYSATKNHYYDVPTSSTEPQTNPMPNYDIAENLMNNICEAYYKTCQYSLDELAKY
SKAIRSQEGILQFQNMAPDQLWSFCAEKITEAIQHVVEFAKHSHAFMSLDQHDQIILLKT
GCLEVVMVRMARAFNPSNQTVLFDEKYTHIETFRGLGCDDLINGMFEMAKSIAELNLTED
QIALFSFAVLITGDRPGLRESTRLNKLQSVVLGSLQEMFLKTHSNPQNILTKLVMSMLNL
RNLSRLHSKYFLQYKHQFGNILLPPLYKELFCVDDFQSQQYFPAEPGFDQVQRRTSVCYE
GQDIGYIDGSTVGTTELASNGSSGSCAIDGRCAMIPGPAFAPCTSRSSSTSSVSSSGTAP
LGNLSCDDISPMLSDNKSVPGGEQLGLDHINHTEEQIQRNQLVEAERLMEAALHEHTPLS
NPTGYPVQLTMLAHSQQHLHGHDNNSLGGIPHLSI

Nucleotide sequence

Length: 2,113

>Cisavi.CG.ENS81.R1.2477029-2488559.17166.t
TGTAGTTATATGACAGTAGGTATCCGACTTTGCTGTCATATATGCTAATACAAAAAGCCT
ATGACTTTAATTACTCAGAATATATATTATGTTTTTAATTTAAGAGTTATATTTTGTGAA
GAAAGAAATACAATCGGTGCAATCTCAAGTCATATGTGTCAAGAAGCGTTGAATACCTCA
ACTTCTGTGTGCTCTTCAACAAAACATGAAGACTGCAAAAGGAAAAGCCCAAATCGAGAT
CATACCTTGTAAAGTGTGCGGAGACAAGTCGTCAGGAATTCACTACGGGGTTATAACATG
CGAAGGCTGCAAGGGTTTCTTTCGTCGAAGCCAGCAGAATAACTACGCATACTCGTGTCC
AAGGCATGGGAACTGTATTATAGACCGAAGCAATAGAAATCGTTGTCAACATTGTCGATT
GCAAAAATGTCTCAGAGCTGGCATGTCCAAAGACGCTGTGAAATTCGGTCGGATGTCGAA
AAAGCAACGGGACCGACTCTACCTTGAAGTGTTGAAGCAGCAGCAACTGCGATCCGGCCA
ACCACAACCCGAGAGCGAAGCGTTTAACCAAACAAAGCACAGTGCGGTTACCCATAGCCC
CCCGACTGAGACGAATGTGACGTCATACTTTACAACAGCGGAACAACGCAATGACGTCAT
GGTGAAACTTGAGCCGTCCAACGAGAATACCTTTAACCCGAACCACGACCCTTTGACGCC
TCCTACCGTCCAACCCGTGCCCATGGAAAGCAAAGCGGCCGAATACTCCGCAACTAAAAA
CCATTATTACGATGTCCCGACGTCCTCGACCGAACCGCAAACAAACCCGATGCCCAACTA
CGACATAGCAGAAAACCTGATGAACAACATATGCGAGGCTTACTACAAAACCTGTCAGTA
CTCGCTGGATGAACTCGCCAAATATTCTAAAGCGATTCGTTCGCAAGAAGGCATTCTGCA
GTTCCAGAACATGGCTCCGGATCAACTTTGGAGTTTCTGTGCTGAGAAAATAACGGAGGC
AATCCAACATGTTGTGGAGTTTGCTAAGCATTCACACGCATTCATGTCGCTCGACCAACA
CGACCAGATCATACTACTGAAAACAGGTTGCTTGGAAGTGGTGATGGTACGAATGGCTCG
TGCGTTCAACCCGTCCAACCAAACCGTTCTATTCGACGAGAAGTACACTCACATTGAAAC
GTTTAGGGGACTTGGCTGCGACGATTTGATCAACGGAATGTTCGAAATGGCAAAGTCGAT
TGCCGAGCTGAATCTGACCGAGGACCAGATTGCTCTCTTCTCGTTTGCCGTGCTCATCAC
TGGAGACCGGCCAGGTTTGCGCGAATCAACTCGCCTGAACAAGCTACAGTCTGTCGTGCT
TGGCTCACTACAAGAAATGTTCCTCAAAACACACAGCAACCCGCAGAACATATTGACAAA
GTTGGTCATGAGCATGCTGAATCTTCGCAATCTCAGCCGTCTGCACTCCAAGTATTTCCT
TCAGTACAAGCACCAGTTCGGCAATATATTGCTCCCGCCTCTGTACAAAGAGCTTTTCTG
CGTCGACGATTTTCAGAGTCAGCAGTATTTCCCGGCCGAGCCCGGCTTTGACCAAGTACA
ACGACGCACCAGCGTATGCTACGAAGGCCAAGATATCGGTTATATTGACGGCTCTACTGT
CGGCACGACCGAGCTCGCTTCGAACGGTAGCTCGGGTTCGTGCGCGATTGACGGCCGCTG
CGCGATGATTCCAGGTCCTGCCTTCGCACCTTGTACCAGTCGGTCCTCATCCACGTCCTC
GGTGAGCAGCAGCGGGACTGCCCCGCTTGGCAACCTCAGCTGCGACGACATTTCCCCGAT
GCTGTCGGACAACAAATCGGTGCCAGGAGGGGAACAACTTGGTCTGGATCATATTAATCA
CACCGAGGAGCAGATACAGAGGAACCAGCTCGTCGAAGCAGAGCGTTTAATGGAAGCAGC
TCTGCACGAGCACACCCCTCTCTCAAACCCCACTGGCTACCCAGTTCAACTGACGATGTT
GGCCCACAGCCAGCAACACTTGCACGGCCATGACAACAATAGCCTTGGTGGAATCCCTCA
CTTATCCATATAA

InterProScan

Gene3D	Znf_NHR/GATA (IPR013088) - T[5-113] 1.0E-34
ProSiteProfiles	Znf_hrmn_rcpt (IPR001628) - T[12-87] 19.901
SMART	Znf_hrmn_rcpt (IPR001628) - T[12-83] 9.0E-39
Pfam	Znf_hrmn_rcpt (IPR001628) - T[14-82] 4.4E-32
ProSitePatterns	Znf_hrmn_rcpt (IPR001628) - T[15-41] .
PRINTS	Znf_hrmn_rcpt (IPR001628) - T[15-31] 2.8E-18 - T[31-46] 2.8E-18 - T[64-72] 2.8E-18 - T[72-80] 2.8E-18
PRINTS	Nuclear_hrmn_rcpt (IPR001723) - T[76-86] 4.8E-18 - T[268-289] 4.8E-18 - T[289-305] 4.8E-18 - T[355-370] 4.8E-18 - T[412-429] 4.8E-18
SUPERFAMILY	NHR_like_dom_sf (IPR035500) - T[207-452] 6.55E-56
PRINTS	ThyrH_rcpt (IPR001728) - T[265-286] 1.5E-9 - T[291-310] 1.5E-9 - T[355-377] 1.5E-9
SMART	Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[267-424] 5.1E-24
Pfam	Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[269-430] 1.0E-19