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  1. Clone 'cien98036'
  2. Transcript 'Cisavi.CG.ENS81.R132...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R132.1810187-1815789.11096.t

Possible name(s)

IGFALS; LRRC70; LRRTM1

Location

R132 [1,810,186 / 1,815,789]

Sequences

Amino acid sequence

Length: 528

>Cisavi.CG.ENS81.R132.1810187-1815789.11096.p
MNGISRYMVLIIAFRTLPLADSVDSKCRNSRGCENNKCRFRYRTRMLNCAAWYMDCIPQP
SSIRSAAPPEYATSMFFSDNCLRTVRAADLQRYTCLRNLNLSKNFITTLDCSFKGLSTLK
QLDLSENKISKIYEDDFSTLTNLTELNLSKNQLFQLDKNAFKNLPSLKVLDLRHNRLTTF
LPGHLSGLAKLRVFMIAHNHLQTIDQHLFTSSPHLEEIDLSSNVIQCLPQNVFELMSELK
SVKLMSNQLRTPHPHWVRRINQNEFLPQIKLLENNNWTCDCRAANYAEFLNEELVSDHQS
KWKEALNIRCSHPKRYQGALLTDVFVSRCVEPPNVKCGQLPVLRTMRSTTTPISVTTTLR
IESTTTTTTTLKTTTTTTPDIQSSNTHPQPAQEKLSRESSLIDWGSQIYPILLISILVVI
VVALILGFILWRFKVKFKKRAEKPTYNRVSSATSGISSRTNSTTTATTNGDDNTQPKTVI
HTSNYLVHAADEPTHIYQHRSRCHTDSGCYDGDTERENFYHAINGSNA

Nucleotide sequence

Length: 2,010

>Cisavi.CG.ENS81.R132.1810187-1815789.11096.t
ATGTAGAAGTAGGGTTTTCCATTACTTCTACATATATTAAATATTAAGATCTATAATATG
CAAATTAGCTGATCATGAACGGAATTTCAAGATACATGGTTCTAATCATTGCATTTCGAA
CTCTACCCTTGGCAGATTCAGTTGATTCCAAATGTAGAAATTCCAGGGGTTGTGAAAATA
ATAAATGCAGATTCAGGTACAGAACTCGCATGCTGAACTGTGCGGCATGGTACATGGATT
GCATTCCTCAGCCTTCATCTATCAGGAGTGCAGCTCCCCCAGAATATGCCACCTCCATGT
TTTTCAGCGACAATTGCTTGCGGACTGTTAGAGCAGCTGACCTGCAAAGGTATACCTGTC
TTCGAAATCTTAACTTGTCCAAAAACTTCATTACCACTCTTGATTGCAGTTTTAAAGGAT
TGTCAACATTAAAGCAATTGGATCTTAGCGAGAATAAGATAAGCAAAATATATGAAGATG
ATTTTTCAACCTTGACAAACTTGACTGAACTCAATCTCAGCAAAAACCAGTTATTCCAAC
TGGATAAAAATGCTTTTAAAAATCTTCCATCGTTGAAAGTTCTAGACTTGCGTCACAATA
GATTGACTACATTTCTTCCCGGTCATTTAAGTGGACTTGCAAAACTGAGAGTATTCATGA
TCGCCCACAATCACCTCCAAACCATCGATCAACATTTATTCACTTCTTCCCCCCATCTAG
AAGAGATCGATCTCAGTTCCAATGTCATCCAATGCTTACCACAGAATGTGTTTGAGCTCA
TGAGCGAGCTTAAATCGGTGAAACTGATGTCGAATCAACTACGCACCCCCCACCCCCACT
GGGTGCGCAGAATCAACCAGAATGAATTCCTTCCTCAGATCAAACTCCTGGAGAACAACA
ACTGGACGTGTGATTGTCGGGCAGCGAATTACGCGGAATTCTTGAATGAAGAACTGGTAT
CTGACCACCAATCGAAATGGAAGGAAGCACTGAACATACGATGCTCCCACCCCAAGAGAT
ATCAAGGCGCTCTGCTCACTGATGTGTTCGTGTCGCGCTGTGTGGAACCTCCGAATGTTA
AATGCGGACAACTTCCTGTGCTCCGTACAATGAGAAGTACTACAACACCAATAAGCGTGA
CGACGACCTTAAGAATCGAGTCAACAACGACAACAACGACAACATTAAAGACGACCACGA
CCACCACGCCTGACATTCAGTCGTCCAACACCCACCCACAACCTGCACAAGAGAAATTAT
CACGCGAATCTTCTTTAATTGATTGGGGGAGTCAAATTTACCCCATTCTGCTGATTAGTA
TTTTGGTAGTTATCGTTGTTGCGCTCATTCTGGGTTTCATACTTTGGCGTTTTAAAGTGA
AATTTAAAAAGAGAGCGGAGAAACCGACTTACAATCGCGTGAGTTCGGCAACAAGTGGTA
TATCTAGCAGGACCAACTCTACCACGACGGCAACGACAAACGGCGATGATAATACCCAAC
CAAAGACTGTTATACACACGTCAAATTACCTTGTACATGCGGCAGACGAGCCCACCCACA
TCTACCAGCATAGATCGCGCTGTCACACTGATAGTGGTTGTTATGACGGTGATACCGAGA
GGGAAAACTTTTACCACGCCATTAATGGCTCCAATGCATAAACTTAGTGCCCTGCCCATA
AATTCGAGTTGATTTTTACCTTTATTGTTTTTTCTACTAGTTCATATAAATACATTTTTA
AAGTTCAAATAATGTGTATACCAATCAGTAGGATATTTTAATACTTTTCTGTTGTATATG
TGCCACTGTTATACATAGCCTCGCATATTAATACATTTTAACCGTCCTAAACATTGCTGA
TCGCTTATTTTTACACTTTATACTTTGCTTATCTTACAAAGTCGTATGCACTCCGAATTA
TAACAAGTGCTTGTTTAACGTTATGTTTATATAGCCAACGCTATTTTATTAGTTGCCTTT
CAATCCCGCGTAGACCTTAATAGTAATCGC

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[33-206] 2.1E-36 - T[207-338] 1.4E-16
SMART
Leu-rich_rpt_typical-subtyp (IPR003591) - T[93-115] 310.0 - T[116-139] 17.0 - T[140-163] 0.0023 - T[164-187] 0.35 - T[188-211] 4.4 - T[213-235] 6.0
ProSiteProfiles
Leu-rich_rpt (IPR001611) - T[95-117] 6.387 - T[118-139] 8.074 - T[142-163] 7.258 - T[166-189] 6.634 - T[190-211] 5.209 - T[214-235] 6.757
Pfam
Leu-rich_rpt (IPR001611) - T[117-130] 1.5 - T[141-201] 1.8E-15 - T[212-225] 1.6
SMART
Cys-rich_flank_reg_C (IPR000483) - T[275-328] 8.0E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ALS_HUMAN 33.333 % 89 1.38E-18
LRR70_HUMAN 24.062 % 93.6 3.96E-20
LRRT1_HUMAN 27.003 % 90.5 2.84E-19





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