- Transcript 'KH2012:KH.C2.88.v1.A...' >
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- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C11.159.v1...' >
- Transcript 'Cisavi.CG.ENS81.R132...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R132.1950674-1967791.11774.t
Possible name(s)
CLCN3; CLCN6; CLCN7
Gene model
Location
R132 [1,953,200 / 1,967,791]
Amino acid sequence
Length: 686
>Cisavi.CG.ENS81.R132.1950674-1967791.11774.p
PYWQALDYDTIENDLYSEEERKMSSTVCDYFQRWVVCMLIGIMTGLVAVVINICILELTE
VKMRVVEQAIIRCVKDSCLYIPLLLWIAINISLVTVASLLTVFIAPVAAGSGIPQIKCFL
NGVKIPNVVRFQTLVTKVVGVIASVSGGLAVGKEGPMIHSGSVLAAGISQGRSISLNINT
RFFEHFRNDREKRDFVCAGAAAGVSAAFGAPVGGVLFSLEEAASFWNQALTWRIFFCSIL
SSYTLNFFMGIYHHHPGDLAYPGLINFGKFDGSYEGFELPIFLLMAVIGGLLGAAFNAIN
YRITVFRLTYLKARYFKVLEVVFVAAVSATIAFVLMYWNSECKPLGQDPNVKLQFFCNDG
EYNTMAVLFFTPPEESVKSLFHDPLGAIRPLTIIVFVIPYFFLACWTYGLQVPSGLFIPS
LLIGAAWGRVVGNCVNLLWPADEWAQDLSKYALIGAAAQLGGTVRMTISLTVILIEATGN
ITYSLPLMAVLLLAKWVGDYFNHGIYDMHIHLNKVPILPWEPPALSTNIQAREVMGSPVV
TLRTVPLVSDICSVLSDPRNCHSGYPVTDTDGKFRGLILRTQLLILLKHKEFIERSGSGE
RIALSVFRDSYPRYFPLSLINVSEGEQQCHVDLRPFLNPSPYTVYENATLPRIFRLFRAL
GLRHLVVLDDDYKVVGMVSRKDIWKW
Nucleotide sequence
Length: 2,333
>Cisavi.CG.ENS81.R132.1950674-1967791.11774.t
CCATATTGGCAGGCGCTGGACTATGATACGATTGAAAATGATCTTTATTCTGAGGAAGAA
AGGAAAATGTCAAGCACTGTATGTGATTATTTCCAGCGATGGGTGGTGTGCATGTTGATT
GGTATCATGACGGGTCTTGTCGCTGTCGTGATCAATATTTGCATCCTTGAGCTTACTGAG
GTGAAGATGAGGGTGGTTGAGCAAGCCATCATAAGATGCGTAAAAGATAGTTGCTTATAC
ATTCCACTTCTACTATGGATCGCCATCAACATTAGTCTGGTCACCGTAGCTTCTCTACTC
ACTGTGTTTATTGCGCCGGTGGCAGCAGGGAGCGGCATACCGCAAATCAAATGTTTCTTG
AACGGAGTGAAAATCCCGAACGTTGTTCGTTTCCAAACCCTGGTGACGAAGGTGGTTGGA
GTGATCGCATCTGTGTCGGGGGGACTCGCTGTGGGGAAGGAAGGTCCCATGATCCACTCC
GGGTCGGTACTTGCAGCCGGTATCTCCCAAGGTCGATCCATCTCACTCAATATCAACACG
AGGTTCTTCGAGCATTTCAGGAACGACAGGGAAAAGAGGGATTTCGTGTGCGCAGGTGCA
GCTGCAGGAGTGTCGGCAGCGTTCGGAGCCCCAGTAGGAGGCGTCTTGTTCAGTCTGGAG
GAAGCAGCTAGTTTCTGGAATCAAGCACTCACATGGAGAATCTTCTTCTGCTCCATATTA
TCGAGCTACACCCTGAACTTCTTCATGGGGATTTACCACCATCACCCTGGGGACCTCGCG
TACCCTGGTCTCATCAACTTCGGGAAGTTCGACGGGTCGTACGAGGGCTTCGAACTCCCC
ATCTTCCTGCTGATGGCAGTGATCGGTGGATTACTTGGGGCTGCATTCAACGCCATCAAC
TACAGGATCACTGTGTTCCGGCTGACGTATCTGAAAGCGCGATATTTCAAGGTGTTGGAA
GTTGTGTTTGTGGCTGCGGTAAGCGCAACCATCGCGTTTGTCCTCATGTACTGGAACTCT
GAGTGTAAACCCCTCGGACAAGACCCCAACGTCAAGCTACAGTTCTTCTGCAACGACGGA
GAGTATAACACGATGGCTGTTCTATTCTTCACCCCCCCTGAAGAAAGTGTGAAGAGTCTC
TTCCATGATCCCCTCGGTGCCATTCGCCCATTAACCATCATCGTATTCGTCATTCCATAT
TTCTTCCTGGCGTGTTGGACCTATGGTTTGCAGGTCCCCAGTGGATTGTTCATCCCCTCC
CTATTGATCGGAGCAGCGTGGGGTCGGGTGGTTGGGAATTGTGTGAACCTTCTGTGGCCG
GCTGATGAGTGGGCTCAAGATCTATCGAAGTACGCGCTGATTGGGGCTGCTGCACAACTT
GGGGGCACAGTGCGCATGACCATCAGCCTCACTGTGATACTGATCGAAGCCACAGGAAAC
ATCACGTACAGCCTCCCACTGATGGCAGTGCTGCTGCTAGCCAAGTGGGTGGGGGATTAC
TTCAACCATGGTATTTACGACATGCACATCCACCTCAACAAGGTCCCCATACTGCCATGG
GAACCTCCTGCGTTGTCCACCAACATACAAGCACGAGAAGTGATGGGATCCCCTGTTGTC
ACCCTTCGCACAGTACCCCTCGTGTCGGATATATGCAGTGTTCTATCCGACCCTCGTAAC
TGCCACAGTGGGTACCCCGTCACTGATACTGATGGGAAGTTCCGAGGGTTGATACTCAGG
ACCCAACTTCTCATATTGCTCAAACACAAGGAGTTTATTGAGCGCAGCGGGTCGGGTGAG
CGAATCGCTCTCAGTGTATTCCGCGATTCCTACCCCAGGTACTTCCCCCTATCGCTGATC
AACGTGAGTGAGGGTGAACAACAATGCCACGTCGACCTTCGACCTTTCCTCAACCCTTCC
CCATACACAGTGTACGAGAACGCCACCCTTCCGCGCATATTCCGTTTGTTCCGTGCTCTT
GGATTGCGACACCTGGTGGTACTTGATGATGATTATAAGGTGGTAGGAATGGTGTCGAGA
AAGGATATATGGAAGTGGGAACATACAGAGAAAGTGCACGACGATTGACCATCATATACT
GCCATGTCAGCGCTGAACAACTAATGGAAATTATCTCGTTTTTATTTGTCAACTTTTAAA
ATATTTTTAAAGGCATCGTTGATACGATTTTGGTAAAACTGTGTTTTTATTGAGAAATAT
TTTTAACGAAGGTATATTGTTGTTGTTATTAGCTGGAGTATATTTGCACGAATTGCTTTT
ACTTTAGATTGGTGACCTCGTAATTTTGATCATTTAAATGGCATTAATCGTAT
| Gene3D |
Cl-channel_core (IPR014743) - T[25-520] 5.4E-137 |
| SUPERFAMILY |
Cl-channel_core (IPR014743) - T[26-338] 7.72E-105 - T[370-521] 7.72E-105 |
| Pfam |
Cl-channel_volt-gated (IPR001807) - T[94-499] 1.2E-96 |
| PRINTS |
Cl-channel_volt-gated (IPR001807) - T[106-123] 8.3E-67 - T[137-156] 8.3E-67 - T[201-220] 8.3E-67 - T[412-432] 8.3E-67 - T[449-465] 8.3E-67 - T[467-486] 8.3E-67 - T[505-519] 8.3E-67 |
| Pfam |
CBS_dom (IPR000644) - T[532-588] 0.0017 - T[637-683] 1.6E-6 |
| ProSiteProfiles |
CBS_dom (IPR000644) - T[535-595] 8.698 - T[637-686] 12.145 |
| SMART |
CBS_dom (IPR000644) - T[538-588] 1.2 - T[640-686] 6.0E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLCN3_HUMAN | 29.825 % | 238 | 4.68E-68 |
| CLCN6_HUMAN | 43.857 % | 464 | 1.12E-152 |
| CLCN7_HUMAN | 58.596 % | 754 | 0 |