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  1. Transcript 'Cisavi.CG.ENS81.R13....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R13.2206772-2211210.13047.t

Possible name(s)

RFC2; RFC4; RFC5

Location

R13 [2,206,771 / 2,211,210]

Sequences

Amino acid sequence

Length: 327

>Cisavi.CG.ENS81.R13.2206772-2211210.13047.p
MTKDQTNLPWVEKYRPKSLDDLISHEDILSTITGFLEQNRLPHLLFYGPPGTGKTSTILA
CAKKLYSPAEFNSMVLELNASDDRGIETVRNQILSFASTRTIFNRGFKLIILDEADAMTK
DAQNALRRVMEKFMENTRFCLLCNYLTKIIPAIQSRCTRFRFGPLSNDKIVNRLKYIVSE
ENLTVTESGMAALVTLSNGDMRKALNVLQSTSMAHDEVTDDNVYKCTGRPRRSDIEKIVK
WMLNENYTNAYKYTMQLCAETRMALQDIIEQIHIFVHEIHFPTAVRIYLLDKLAEIEHRL
AFGTSEKLQMGALVAAFQQAKNMVAAS

Nucleotide sequence

Length: 1,047

>Cisavi.CG.ENS81.R13.2206772-2211210.13047.t
CGAGTTTGTTCAGTATACTTGGTAAAATAATTAGAAAACATGACAAAGGATCAAACCAAT
CTACCTTGGGTCGAAAAGTACCGTCCCAAATCTTTGGATGATCTTATTTCCCACGAAGAT
ATATTAAGTACGATTACAGGATTTTTGGAACAAAATCGGTTGCCACATTTGCTCTTTTAC
GGCCCGCCTGGGACAGGCAAAACTTCGACGATACTTGCATGTGCGAAAAAGTTGTACTCA
CCTGCGGAGTTCAACTCTATGGTGTTGGAACTGAACGCTTCTGACGATCGAGGGATAGAA
ACCGTTCGGAACCAGATCTTAAGTTTTGCAAGCACAAGAACAATATTCAACCGCGGTTTC
AAGCTGATTATTCTCGATGAAGCAGATGCAATGACAAAGGACGCACAGAATGCCCTCAGA
AGGGTAATGGAGAAATTCATGGAAAACACCAGATTCTGTCTCCTTTGTAATTATCTTACA
AAGATCATCCCTGCGATTCAATCGCGTTGCACCAGATTTCGATTCGGACCACTCTCCAAT
GATAAGATAGTAAACAGATTAAAGTACATTGTGTCAGAGGAGAACTTAACCGTCACCGAA
TCTGGCATGGCAGCGTTGGTCACATTATCGAATGGGGACATGCGGAAAGCACTCAATGTG
TTGCAGAGCACTTCTATGGCTCATGATGAAGTGACTGATGATAACGTTTATAAGTGCACA
GGACGACCACGCCGCAGTGATATTGAAAAGATTGTGAAATGGATGTTGAACGAAAACTAC
ACAAATGCCTACAAATACACAATGCAGCTTTGCGCCGAAACCCGAATGGCCCTACAGGAT
ATCATTGAACAGATCCACATTTTTGTGCACGAGATCCATTTTCCCACCGCCGTCCGGATA
TATTTGCTCGATAAACTTGCAGAGATCGAACACAGACTGGCGTTCGGGACAAGTGAAAAA
CTGCAGATGGGTGCGCTGGTTGCAGCATTCCAACAGGCTAAGAACATGGTTGCTGCATCA
TAATGCAGATTGTTGTGTAATAATAAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[7-226] 9.53E-53
SMART
AAA+_ATPase (IPR003593) - T[40-168] 5.4E-12
Pfam
ATPase_AAA_core (IPR003959) - T[44-161] 7.5E-16
SUPERFAMILY
DNA_pol3_clamp-load_cplx_C (IPR008921) - T[230-321] 4.25E-21
Pfam
Rep_factorC_C (IPR013748) - T[230-316] 1.5E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RFC2_HUMAN 38.658 % 225 1.35E-71
RFC4_HUMAN 41.433 % 247 7.35E-80
RFC5_HUMAN 65.625 % 468 4.28E-167





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