- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Clone 'man21m16' >
- Transcript 'Boleac.CG.SB_v3.S327...' >
- Transcript 'Cisavi.CG.ENS81.R13....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R13.2222338-2228063.13129.t
Possible name(s)
DMWD; WDR20
Gene model
Location
R13 [2,222,337 / 2,224,565]
Amino acid sequence
Length: 204
>Cisavi.CG.ENS81.R13.2222338-2228063.13129.p
MNEDRCVEKSRVTCVRWFPNSETMLLSSHISGYMYTYDISQPCLNVIPQYHSQPDKLGDG
YMIHSLKIKNSSSGSNGSSVVTRNPVCRWTMTRDGSGVHNFAFSPCARFVAVVTQNGYLR
ILDINTYELHGCMKSYFGGLLSCCWSPDGRFVVTGGEDDLVTVWSFCEKYVVARGRGHKS
WVNEVSFDALCCSIPSDSDMKTFY
Nucleotide sequence
Length: 760
>Cisavi.CG.ENS81.R13.2222338-2228063.13129.t
GACAAGCGAACTTACAAAGGTGTTGCCCCAACTTGTCACGACATCAACCAGAAAACATCC
TGCGCTGAAAGTGTGAGGGTGGCTGTGGGTTTCATTGCAGGCCAGGTGCAGATAATCGAT
GTGGGGACGAAAGAAAGCCTTCAAATTATGAATGAAGATCGGTGTGTTGAAAAGAGTAGA
GTGACATGCGTCAGGTGGTTCCCCAACAGTGAGACCATGTTATTATCCTCTCATATCAGT
GGCTACATGTATACATACGACATTTCCCAACCCTGCCTCAATGTAATACCACAGTACCAC
TCACAGCCGGATAAGTTGGGAGATGGATATATGATCCACAGTTTGAAGATCAAGAACTCG
TCCTCTGGGAGCAACGGGAGCTCCGTGGTAACGAGGAACCCCGTGTGCAGGTGGACCATG
ACACGGGACGGTTCTGGGGTTCATAACTTTGCGTTTTCGCCATGCGCAAGATTCGTCGCT
GTGGTTACCCAGAACGGTTATTTACGTATCCTTGACATCAACACATATGAGCTGCACGGA
TGCATGAAGAGTTATTTTGGAGGGTTGCTCTCTTGTTGTTGGAGCCCCGACGGTAGGTTC
GTGGTCACTGGGGGTGAGGACGACCTCGTGACTGTTTGGTCGTTCTGCGAGAAGTATGTC
GTCGCTCGTGGAAGGGGCCACAAATCGTGGGTAAACGAGGTTTCATTTGACGCTTTGTGC
TGCAGTATACCGTCTGATTCGGACATGAAAACGTTTTATG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-202] 5.0E-52 |
| SMART |
WD40_repeat (IPR001680) - T[3-38] 11.0 - T[84-123] 1.7 - T[126-165] 7.8E-5 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[9-189] 9.42E-26 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[91-204] 13.448 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[133-165] 10.375 |
| Pfam |
WD40_repeat (IPR001680) - T[140-165] 3.1E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR20_HUMAN | 49.01 % | 202 | 2.18E-62 |
| DMWD_HUMAN | 50.532 % | 197 | 1.32E-59 |