- Transcript 'Cisavi.CG.ENS81.R132...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R132.239382-248708.05580.t
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
R132 [239,381 / 248,126]
Amino acid sequence
Length: 492
>Cisavi.CG.ENS81.R132.239382-248708.05580.p
MLQQSLGVKMLLIQDSTDNIGQSKPLRITGAQMNLDNAVNAVHQLMANRDQQLAQQKVDR
DGSGMDPNMFGDDVNKTIIPVPKAAVGVVIGKGGDMINQIQNVTGTRIQFKPEDPGLPER
MCSIMGQKEGVDAAIRRIHEIIQNVQERDGNRSGGGGGGGPPGGMGSFGQWEGPNMGRGN
RGMGVSSEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSDLNYKTFIIKG
TPEQIKMCRQLIQEKVDAGPGGQNNGQMQSSHMGGQPPMGNFGPPQQQGGYGGLPPAASY
GHPNPLQGPPQAPQAPQSYQQPWGSQFQQWSSPSVSAPQQNGADPTKPVADSSNAAAWQS
YLQMYGAQAQAAYQQPTAAAAVSAAPASQPDYSKQWDEYLKQNGLTAAAVAERQQLALAS
PAAAAAIQQQVAAPAAAAAAPTAAAAAVAQPATTQADYSAAWAEYYRQYYAMHGQAGYAA
AAAAAGQAPAPT
Nucleotide sequence
Length: 1,764
>Cisavi.CG.ENS81.R132.239382-248708.05580.t
GGGTGATGGAGTCGAGAAATCAATCGAGATTGCCGTTCCTCCTGACAAGTGTGGGCTCAT
TATCGGCAAAGGTGGCGAAACTATCAAAATGTTGCAGCAGAGCTTAGGCGTGAAGATGCT
TCTCATCCAGGATTCAACCGATAACATCGGCCAGAGCAAACCTCTCAGAATAACAGGGGC
ACAGATGAATCTAGATAATGCTGTGAATGCGGTTCACCAACTAATGGCGAACAGAGACCA
GCAATTGGCCCAGCAGAAAGTGGACAGAGATGGAAGTGGAATGGATCCCAACATGTTTGG
AGATGACGTGAACAAGACCATCATTCCGGTCCCCAAAGCAGCTGTTGGCGTTGTTATTGG
GAAAGGTGGTGACATGATCAATCAGATTCAAAATGTCACCGGAACCAGAATCCAATTTAA
ACCAGAGGATCCTGGCTTACCTGAGCGAATGTGTAGCATCATGGGACAGAAGGAAGGAGT
GGATGCGGCTATTAGAAGAATACACGAGATAATACAGAACGTGCAAGAGCGTGATGGCAA
CCGTAGCGGGGGTGGTGGTGGTGGTGGCCCTCCAGGGGGCATGGGGAGTTTCGGACAATG
GGAAGGCCCCAACATGGGCCGCGGCAACCGTGGGATGGGTGTGAGCTCTGAAGAACACTT
AGTGCCTGCCAATAAGACCGGACTTGTCATTGGAAAAGGCGGTGACACGATAAAGCAGAT
CAACATGCAATCGGGCGCTCACGCTGAGATTCAAAGGAATCCTCCGCCTGGTTCCGACCT
CAACTACAAAACCTTCATCATCAAAGGAACTCCGGAGCAGATAAAAATGTGTCGACAGCT
GATACAAGAGAAGGTGGACGCTGGACCTGGTGGTCAGAATAATGGTCAGATGCAAAGTAG
TCACATGGGTGGTCAACCCCCGATGGGCAACTTTGGACCACCTCAACAACAAGGTGGATA
TGGTGGTCTTCCACCAGCTGCAAGTTACGGCCACCCCAACCCACTGCAAGGCCCTCCTCA
GGCCCCACAAGCGCCCCAGTCGTACCAGCAACCGTGGGGGAGTCAGTTCCAACAGTGGAG
TTCACCCAGTGTCTCAGCCCCACAGCAAAACGGTGCAGATCCAACGAAACCAGTGGCAGA
TTCGAGCAATGCAGCAGCATGGCAGTCTTACCTTCAGATGTATGGAGCCCAAGCACAAGC
TGCATACCAGCAGCCAACTGCTGCAGCTGCAGTTTCTGCTGCCCCAGCCAGTCAACCAGA
CTACTCCAAACAATGGGATGAATACCTGAAGCAAAATGGTCTCACGGCTGCAGCAGTTGC
TGAGCGTCAACAGCTCGCACTGGCTTCCCCTGCCGCGGCTGCTGCCATCCAACAACAGGT
TGCGGCTCCAGCCGCCGCGGCTGCTGCACCAACTGCTGCCGCCGCCGCAGTTGCCCAACC
CGCCACCACCCAGGCGGACTACTCTGCAGCATGGGCTGAATACTACCGACAATACTACGC
CATGCACGGCCAAGCTGGATATGCGGCCGCAGCAGCTGCAGCTGGACAGGCACCTGCACC
AACGTAAAGCGCTTCCTACACAAACACATTGTATATAAAGGGGGATGGTCTAGCACAAAC
GCAGTTGGCGTTTTCAATCATAATTTCGATCCAAACTAATTTTTCAACCGTGCTGAGAAT
GTACATTGTTACGAACCATTATTACTCATTGTGCCGTGTGCTCTGTCGTTTTCAAGTAGC
TCTAAATAAATGCTGTCATTGAAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[1-54] 5.1E-5 - T[68-171] 3.9E-25 - T[182-260] 8.8E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[71-148] 4.38E-19 - T[183-257] 1.75E-15 |
| SMART |
KH_dom (IPR004087) - T[73-143] 3.0E-15 - T[184-257] 1.5E-11 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[77-140] 1.1E-15 - T[190-254] 3.3E-14 |
| Pfam |
FUBP_C (IPR015096) - T[387-417] 3.3E-6 - T[450-468] 5.2E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 41.887 % | 175 | 5.13E-48 |
| FUBP2_HUMAN | 32.727 % | 176 | 3.11E-48 |
| FUBP3_HUMAN | 37.713 % | 194 | 1.06E-55 |