- Transcript 'KH2012:KH.C12.396.v1...' >
- Transcript 'Cisavi.CG.ENS81.R132...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R132.239382-248708.05583.t
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
R132 [239,420 / 248,708]
Amino acid sequence
Length: 520
>Cisavi.CG.ENS81.R132.239382-248708.05583.p
RDIMSETIRLPDDLVGLIIGRGGENIMRMQRETGCRIQITQSIPGTKERPCTLSGTPEQI
EYVHFLYGMDGGMGGGMGGGNMGGMGDGVEKSIEIAVPPDKCGLIIGKGGETIKMLQQSL
GVKMLLIQDSTDNIGQSKPLRITGAQMNLDPNMFGDDVNKTIIPVPKAAVGVVIGKGGDM
INQIQNVTGTRIQFKPGNYNISDIFSLIHHYRLSCNEYRVILPLPGNRSGGGGGGGPPGG
MGSFGQWEGPNMGRGNRGMGVSSEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQRN
PPPGSDLNYKTFIIKGTPEQIKMCRQLIQEKVDAGPGGQNNGQMQSSHMGGQPPMGNFGP
PQQQGGYGGLPPAASYGHPNPLQGPPQAPQAPQSYQQPWGSQFQQWSSPSVSAPQQNGAD
PNSSNAAAWQSYLQMYGAQAQAAYQQPTAAAAVSAAPASQPDYSKQWDEYLKQNGELIFC
PTRHHPGNADYSAAWAEYYRQYYAMHGQAGYAAAAAAAGQ
Nucleotide sequence
Length: 1,736
>Cisavi.CG.ENS81.R132.239382-248708.05583.t
AGGGATATTATGTCCGAGACAATCAGATTACCAGATGACCTTGTTGGGCTGATTATTGGC
AGAGGTGGTGAGAACATCATGAGAATGCAACGCGAAACTGGTTGCAGAATTCAGATCACG
CAAAGTATACCGGGCACTAAAGAACGACCATGCACATTATCGGGCACCCCAGAACAAATT
GAGTACGTTCATTTTCTGTATGGCATGGATGGTGGAATGGGGGGAGGTATGGGAGGGGGC
AACATGGGGGGAATGGGTGATGGAGTCGAGAAATCAATCGAGATTGCCGTTCCTCCTGAC
AAGTGTGGGCTCATTATCGGCAAAGGTGGCGAAACTATCAAAATGTTGCAGCAGAGCTTA
GGCGTGAAGATGCTTCTCATCCAGGATTCAACCGATAACATCGGCCAGAGCAAACCTCTC
AGAATAACAGGGGCACAGATGAATCTAGATCCCAACATGTTTGGAGATGACGTGAACAAG
ACCATCATTCCGGTCCCCAAAGCAGCTGTTGGCGTTGTTATTGGGAAAGGTGGTGACATG
ATCAATCAGATTCAAAATGTCACCGGAACCAGAATCCAATTTAAACCAGGCAATTACAAC
ATATCTGATATTTTTTCGCTAATTCACCATTATAGACTAAGTTGCAATGAATATCGAGTA
ATTCTCCCACTTCCAGGCAACCGTAGCGGGGGTGGTGGTGGTGGTGGCCCTCCAGGGGGC
ATGGGGAGTTTCGGACAATGGGAAGGCCCCAACATGGGCCGCGGCAACCGTGGGATGGGT
GTGAGCTCTGAAGAACACTTAGTGCCTGCCAATAAGACCGGACTTGTCATTGGAAAAGGC
GGTGACACGATAAAGCAGATCAACATGCAATCGGGCGCTCACGCTGAGATTCAAAGGAAT
CCTCCGCCTGGTTCCGACCTCAACTACAAAACCTTCATCATCAAAGGAACTCCGGAGCAG
ATAAAAATGTGTCGACAGCTGATACAAGAGAAGGTGGACGCTGGACCTGGTGGTCAGAAT
AATGGTCAGATGCAAAGTAGTCACATGGGTGGTCAACCCCCGATGGGCAACTTTGGACCA
CCTCAACAACAAGGTGGATATGGTGGTCTTCCACCAGCTGCAAGTTACGGCCACCCCAAC
CCACTGCAAGGCCCTCCTCAGGCCCCACAAGCGCCCCAGTCGTACCAGCAACCGTGGGGG
AGTCAGTTCCAACAGTGGAGTTCACCCAGTGTCTCAGCCCCACAGCAAAACGGTGCAGAT
CCAAATTCGAGCAATGCAGCAGCATGGCAGTCTTACCTTCAGATGTATGGAGCCCAAGCA
CAAGCTGCATACCAGCAGCCAACTGCTGCAGCTGCAGTTTCTGCTGCCCCAGCCAGTCAA
CCAGACTACTCCAAACAATGGGATGAATACCTGAAGCAAAATGGTGAGTTGATTTTTTGC
CCAACCCGCCACCACCCAGGTAATGCGGACTACTCTGCAGCATGGGCTGAATACTACCGA
CAATACTACGCCATGCACGGCCAAGCTGGATATGCGGCCGCAGCAGCTGCAGCTGGACAG
GCACCTGCACCAACGTAAAGCGCTTCCTACACAAACACATTGTATATAAAGGGGGATGGT
CTAGCACAAACGCAGTTGGCGTTTTCAATCATAATTTCGATCCAAACTAATTTTTCAACC
GTGCTGAGAATGTACATTGTTACGAACCATTATTACTCATTGTGCCGTGTGCTCTG
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[1-68] 1.5E-20 - T[80-151] 6.6E-17 - T[152-207] 5.4E-12 - T[258-336] 9.5E-26 |
| SMART |
KH_dom (IPR004087) - T[2-72] 3.4E-11 - T[89-154] 3.5E-6 - T[157-226] 2.7E-4 - T[260-333] 1.5E-11 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[3-63] 1.1E-15 - T[88-146] 4.72E-10 - T[259-333] 1.9E-15 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[6-61] 9.8E-16 - T[93-146] 1.8E-10 - T[161-196] 2.6E-9 - T[266-330] 3.6E-14 |
| SUPERFAMILY |
KH_sf_prok-type (IPR009019) - T[150-196] 8.11E-9 |
| Pfam |
FUBP_C (IPR015096) - T[487-501] 2.6E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 41.287 % | 234 | 1.0E-69 |
| FUBP2_HUMAN | 33.273 % | 219 | 1.73E-63 |
| FUBP3_HUMAN | 36.929 % | 259 | 1.14E-79 |