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- Transcript 'Cisavi.CG.ENS81.R118...' >
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- Transcript 'Cisavi.CG.ENS81.R132...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R132.239382-248708.05584.t
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
R132 [241,986 / 248,708]
Amino acid sequence
Length: 529
>Cisavi.CG.ENS81.R132.239382-248708.05584.p
RDIMSETIRLPDDLVGLIIGRGGENIMRMQRETGCRIQITQSIPGTKERPCTLSGTPEQI
EYVHFLYGMDGGMGGGMGGGNMGGMGDGVEKSIEIAVPPDKCGLIIGKGGETIKMLQQSL
GVKMLLIQDSTDNIGQSKPLRITGAQMNLDNAVNAVHQLMANRDQQLAQQKPNMFGDDVN
KTIIPVPKAAVGVVIGKGGDMINQIQNVTGTRIQFKPGNYNISDIFSLIHHYRLSCNEYR
VILPLPGNRSGGGGGGGPPGGMGSFGQWEGPNMGRGNRGMGVSSEEHLVPANKTGLVIGK
GGDTIKQINMQSGAHAEIQRNPPPGSDLNYKTFIIKGTPEQIKMCRQLIQEKVDAGPGGQ
NNGQMQSSHMGGQPPMGNFGPPQVCCGYGGLPPAASYGHPNPLQGPPQAPQAPQSYQQPW
GSQFQQWSSPSVSAPQQNGADPNSSNAAAWQSYLQMYGAQAQAAYQQPTAAAAVSAAPAS
QPDYSKQWDEYLKQNGELIFCPTRHHPGNADYSAAWAEYYRQYYAMHGQ
Nucleotide sequence
Length: 1,842
>Cisavi.CG.ENS81.R132.239382-248708.05584.t
AGGGATATTATGTCCGAGACAATCAGATTACCAGATGACCTTGTTGGGCTGATTATTGGC
AGAGGTGGTGAGAACATCATGAGAATGCAACGCGAAACTGGTTGCAGAATTCAGATCACG
CAAAGTATACCGGGCACTAAAGAACGACCATGCACATTATCGGGCACCCCAGAACAAATT
GAGTACGTTCATTTTCTGTATGGCATGGATGGTGGAATGGGGGGAGGTATGGGAGGGGGC
AACATGGGGGGAATGGGTGATGGAGTCGAGAAATCAATCGAGATTGCCGTTCCTCCTGAC
AAGTGTGGGCTCATTATCGGCAAAGGTGGCGAAACTATCAAAATGTTGCAGCAGAGCTTA
GGCGTGAAGATGCTTCTCATCCAGGATTCAACCGATAACATCGGCCAGAGCAAACCTCTC
AGAATAACAGGGGCACAGATGAATCTAGATAATGCTGTGAATGCGGTTCACCAACTAATG
GCGAACAGAGACCAGCAATTGGCCCAGCAGAAACCCAACATGTTTGGAGATGACGTGAAC
AAGACCATCATTCCGGTCCCCAAAGCAGCTGTTGGCGTTGTTATTGGGAAAGGTGGTGAC
ATGATCAATCAGATTCAAAATGTCACCGGAACCAGAATCCAATTTAAACCAGGCAATTAC
AACATATCTGATATTTTTTCGCTAATTCACCATTATAGACTAAGTTGCAATGAATATCGA
GTAATTCTCCCACTTCCAGGCAACCGTAGCGGGGGTGGTGGTGGTGGTGGCCCTCCAGGG
GGCATGGGGAGTTTCGGACAATGGGAAGGCCCCAACATGGGCCGCGGCAACCGTGGGATG
GGTGTGAGCTCTGAAGAACACTTAGTGCCTGCCAATAAGACCGGACTTGTCATTGGAAAA
GGCGGTGACACGATAAAGCAGATCAACATGCAATCGGGCGCTCACGCTGAGATTCAAAGG
AATCCTCCGCCTGGTTCCGACCTCAACTACAAAACCTTCATCATCAAAGGAACTCCGGAG
CAGATAAAAATGTGTCGACAGCTGATACAAGAGAAGGTGGACGCTGGACCTGGTGGTCAG
AATAATGGTCAGATGCAAAGTAGTCACATGGGTGGTCAACCCCCGATGGGCAACTTTGGA
CCACCTCAAGTATGTTGTGGATATGGTGGTCTTCCACCAGCTGCAAGTTACGGCCACCCC
AACCCACTGCAAGGCCCTCCTCAGGCCCCACAAGCGCCCCAGTCGTACCAGCAACCGTGG
GGGAGTCAGTTCCAACAGTGGAGTTCACCCAGTGTCTCAGCCCCACAGCAAAACGGTGCA
GATCCAAATTCGAGCAATGCAGCAGCATGGCAGTCTTACCTTCAGATGTATGGAGCCCAA
GCACAAGCTGCATACCAGCAGCCAACTGCTGCAGCTGCAGTTTCTGCTGCCCCAGCCAGT
CAACCAGACTACTCCAAACAATGGGATGAATACCTGAAGCAAAATGGTGAGTTGATTTTT
TGCCCAACCCGCCACCACCCAGGTAATGCGGACTACTCTGCAGCATGGGCTGAATACTAC
CGACAATACTACGCCATGCACGGCCAAGCTGGATATGCGGCCGCAGCAGCTGCAGCTGGA
CAGGCACCTGCACCAACGTAAAGCGCTTCCTACACAAACACATTGTATATAAAGATGCAG
GCCCAGAAGAACCCTCCTGTACATATTCTCTCCTTTTGAACATAGCTACTTCTTCCTCAG
TACGATGCTTTAAACATGAGCATCCCTTATAAACCCCCAGTGGAGTGCCAATCCATTAGC
TTTGCACTTTGGTGCCAAATCATAGCAAACCCTAGGCGGTCC
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[1-68] 1.5E-20 - T[91-168] 7.1E-20 - T[173-228] 5.5E-12 - T[279-357] 9.7E-26 |
| SMART |
KH_dom (IPR004087) - T[2-72] 3.4E-11 - T[89-161] 1.9E-12 - T[178-247] 2.7E-4 - T[281-354] 1.5E-11 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[3-63] 1.13E-15 - T[88-174] 1.52E-14 - T[280-354] 1.9E-15 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[6-61] 1.0E-15 - T[93-157] 4.7E-12 - T[182-217] 2.7E-9 - T[287-351] 3.7E-14 |
| SUPERFAMILY |
KH_sf_prok-type (IPR009019) - T[159-217] 1.83E-9 |
| Pfam |
FUBP_C (IPR015096) - T[508-522] 2.0E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 42.133 % | 247 | 2.72E-74 |
| FUBP2_HUMAN | 34.47 % | 228 | 1.09E-66 |
| FUBP3_HUMAN | 36.996 % | 268 | 5.81E-83 |