Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R132.400734-403984.06181.t

Possible name(s)

AC012314.17; RPS9

Gene model

Cisavi.CG.ENS81.R132.400734-403984

Location

R132 [400,733 / 403,984]

Sequences

Amino acid sequence

Length: 135

>Cisavi.CG.ENS81.R132.400734-403984.06181.p
MPHARSLVYRKTYVTPRRPFEKARLDQELKLIGEYGLRNKREVWRVKYTLAKIRKAARDL
LTLDEKNTRRLFEGNALLRRLVRIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLA
KSIHHARVLIRQRQY

Nucleotide sequence

Length: 702

>Cisavi.CG.ENS81.R132.400734-403984.06181.t
CTGGCATCGAGGTTAATCTTTCTTTTCGCAAGACTTCTCTGTCTAAAGCAGCACCATGCC
GCACGCCAGGAGTTTGGTTTATCGTAAAACCTACGTCACCCCACGTCGACCTTTCGAGAA
GGCTCGATTGGACCAAGAATTAAAGCTCATTGGAGAATATGGTCTCCGTAACAAGCGCGA
GGTTTGGAGAGTAAAATACACTCTCGCCAAGATCCGAAAGGCCGCTCGTGACCTTTTGAC
CCTGGATGAGAAGAACACCCGACGTCTATTTGAGGGTAACGCTTTACTGCGTCGCTTGGT
TCGTATCGGGGTGCTGGATGAGACCAAGATGAAGCTCGATTACGTGCTCGGTTTAAAAGT
GGAGGACTTCTTGGAGCGCCGTCTCCAAACCCAAGTCTTCAAACTTGGCCTTGCGAAGTC
TATTCATCACGCCAGAGTGCTTATCAGACAACGCCAATATTAGAGTTCGCAAACAAGTTG
TGAATATTCCTTCCTTTATTGTCCGACTCGACTCGCAGAAACACATCGATTTCTCCCTAC
GTTCGCCATACGGTGGTGGAAGACCAGGTGACGTCAAGCGCAAGAACGCGAAGAAAGGAG
GCAATGCTGACGAAGAGGACGAGGATTAAACAGGAATCATCCACCGAAGTAGCTGAAATG
TACAGCGTTCTGTGGGCAATAAAACTACTCTCTCAAGATATT

InterProScan

TIGRFAM	Ribosomal_S4/S9_euk/arc (IPR005710) - T[1-133] 1.8E-54
PANTHER	Ribosomal_S4/S9 (IPR022801) - T[8-134] 2.1E-65
SMART	Ribosomal_S4/S9_N (IPR001912) - T[8-107] 1.4E-19
Pfam	Ribosomal_S4/S9_N (IPR001912) - T[19-63] 4.1E-6
ProSitePatterns	Ribosomal_S4_CS (IPR018079) - T[106-130] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS9_HUMAN	91.045 %	242	1.84E-83