- Transcript 'KH2012:KH.L5.8.v3.A....' >
- Transcript 'Cisavi.CG.ENS81.R19....' >
- Clone 'ciad016d10' >
- Transcript 'KH2012:KH.C1.1279.v1...' >
- Transcript 'Cisavi.CG.ENS81.R143...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R143.35370-53881.02929.t
Possible name(s)
PBX2
Gene model
Location
R143 [35,369 / 53,881]
Amino acid sequence
Length: 445
>Cisavi.CG.ENS81.R143.35370-53881.02929.p
MDDQNYGNPPTSHGIGQGYMTGQMHGPPSDYGGNNNAPGSGTPVDLDTRTGEGVMSVVSR
KQDISDVLQQIMTITDQSLDEAQARKHALNVHRMKGALFQVLCEIKEKSVLNMRSPPEDE
PPDPQQLRLDRMLESEGVAGPEGTGSAAAVAAATSSGNDSAEHSDYRAKLAQIRQIYHSE
LEKYNQACNEFTSHVMNLLREQSRTRPISNKEIERMIAIITKKFNNIQLQLKQSTCEAVM
ILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCTITVSQVSNWF
GNKRIRYKKNIGKFQEEANLYAAKTAQAAVSAVQSGHGQEGLGGTPPEHDPVDGNLDSPD
TGPETPTSGHNYSSPSSQRGFGAGDMGFMGVNGEGFNNPNQSMGYGGDSGLTGQPHIYSP
QGGVWQRQEGGNNVTSPGNRSDTAD
Nucleotide sequence
Length: 1,746
>Cisavi.CG.ENS81.R143.35370-53881.02929.t
GTAAAATCAGCTTTCTTTAGATTCAATATAGGTCAAAATTTAGTTAAATACTAGTTTTCG
AACACTATGGACGACCAAAATTACGGAAATCCACCGACTTCGCACGGAATAGGACAGGGT
TACATGACGGGACAAATGCATGGACCCCCTTCAGACTACGGGGGTAACAACAACGCCCCA
GGCAGCGGGACTCCTGTTGACCTAGACACCCGTACAGGAGAAGGGGTGATGTCAGTGGTG
TCACGGAAACAAGATATAAGCGACGTTCTACAGCAGATAATGACGATCACTGATCAGAGC
TTGGATGAAGCACAAGCAAGAAAACACGCTTTAAACGTTCACCGCATGAAAGGAGCACTT
TTCCAAGTTTTGTGCGAAATCAAAGAAAAATCAGTGTTGAACATGAGGTCTCCTCCGGAA
GACGAACCTCCAGATCCTCAGCAACTACGTCTCGATCGGATGTTGGAGTCAGAGGGAGTC
GCAGGGCCTGAAGGAACGGGTTCCGCAGCTGCAGTAGCTGCAGCGACATCGTCTGGAAAC
GACAGCGCAGAACATAGCGATTACCGAGCAAAACTTGCTCAAATCCGACAAATTTATCAT
TCAGAGCTCGAGAAGTATAACCAGGCATGCAATGAATTCACGAGCCACGTGATGAACTTG
CTCCGAGAACAAAGTCGCACTCGTCCGATCTCGAACAAGGAGATCGAAAGAATGATCGCG
ATCATCACAAAGAAGTTCAACAACATCCAACTTCAGCTGAAGCAGAGCACGTGCGAGGCC
GTCATGATACTCAGATCAAGGTTCTTGGACGCAAGACGCAAGCGGCGCAACTTTAGCAAG
CAGGCTACGGAGGTTTTGAACGAATATTTCTATTCCCACCTGAGCAACCCATACCCCAGT
GAAGAAGCAAAGGAAGAATTAGCTCGAAAATGCACCATCACCGTTTCACAGGTATCAAAC
TGGTTTGGCAACAAACGCATCCGATACAAGAAAAACATTGGGAAGTTTCAAGAGGAGGCT
AATCTATACGCTGCTAAGACTGCACAAGCTGCAGTTAGTGCAGTTCAAAGCGGGCATGGA
CAGGAAGGGTTAGGGGGAACTCCCCCAGAACATGACCCCGTGGATGGAAACCTGGATTCA
CCCGATACGGGGCCGGAGACCCCAACATCTGGACACAATTATTCAAGTCCGTCATCTCAA
AGAGGGTTTGGGGCTGGTGACATGGGGTTCATGGGGGTGAATGGGGAGGGGTTCAATAAC
CCCAATCAGAGCATGGGGTATGGAGGCGACAGTGGATTGACAGGACAGCCTCACATCTAC
AGTCCTCAGGGTGGAGTGTGGCAGCGTCAGGAAGGCGGAAATAACGTCACCTCACCCGGA
AATCGCTCCGACACTGCCGACTGATGACGTCATCACTATACGATGACGTCAACACTTGAA
TTGGTGATCTTTTCTTGATGTTGATGTCGCCGATTGTTGCCATTGATGATGTCATACCGT
GTTGATTACGTCATTGTTCGATGACGTCAATCAACGTCATATTTCCATGACCTTTTAAAT
ATTATGTCACAATTATGTTTCTATAATGTCAGAAATGGCAAAAACACCAATCGGAAACTC
GTTTATATTGAATTGCCTCTAATTTAATGAGTAACGTCAACTTTTCCAACTCTTATATTG
TTGAATGCACATTGCATCGAAATAACGACTTAAGTTGTATGAAATCGCCTATCGAACTGT
TAATCA
| Pfam |
PBX (IPR005542) - T[61-248] 2.9E-87 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[247-310] 17.135 |
| SMART |
Homeobox_dom (IPR001356) - T[249-314] 7.0E-16 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[249-317] 9.84E-20 |
| Pfam |
Homeobox_dom (IPR001356) - T[250-309] 2.6E-18 |
| CDD |
Homeobox_dom (IPR001356) - T[250-310] 6.48249E-18 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[285-308] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PBX1_HUMAN | 62.129 % | 455 | 9.11E-159 |
| PBX2_HUMAN | 63.706 % | 455 | 6.43E-159 |
| PBX3_HUMAN | 80.297 % | 441 | 3.28E-153 |