- Transcript 'Cisavi.CG.ENS81.R145...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R145.367997-371014.00619.t
Possible name(s)
HMGB1; HMGB2; HMGB3
Gene model
Location
R145 [367,996 / 371,014]
Amino acid sequence
Length: 205
>Cisavi.CG.ENS81.R145.367997-371014.00619.p
MPTKRDPNKPRGRMTGYAYFVQTCREEHKRKHPNEQVVFAEFSRKCAKRWKALPMSAKEK
QTFIDMAEKDRLRYEKEMKEYAIAGGETKKKKKKKDPNAPKRPQSAFFLFCADRRALLKG
ENPGWTVGEIAKALGKKWAVATPETKKKYADQGEIEKSKYVKEMAKYRAQQESSNHGDAK
RQKIEKPAASSSASSSESESEPESD
Nucleotide sequence
Length: 990
>Cisavi.CG.ENS81.R145.367997-371014.00619.t
ATGCCGACAAAACGAGACCCCAATAAGCCCAGGGGCAGAATGACTGGCTACGCTTACTTC
GTTCAAACCTGCCGAGAAGAGCACAAACGTAAACATCCAAATGAACAAGTTGTTTTTGCT
GAATTTTCAAGGAAATGTGCAAAACGCTGGAAGGCATTACCGATGTCAGCCAAGGAGAAG
CAGACATTCATTGACATGGCTGAGAAGGACAGGCTGCGATACGAGAAAGAAATGAAGGAA
TACGCGATCGCAGGAGGAGAGACCAAGAAGAAGAAGAAAAAGAAGGATCCTAATGCACCA
AAACGACCCCAATCTGCCTTTTTCCTTTTTTGTGCTGATAGGAGAGCTCTCCTCAAAGGA
GAGAACCCAGGTTGGACTGTAGGCGAAATCGCAAAGGCGCTGGGCAAGAAGTGGGCGGTT
GCCACCCCTGAGACCAAAAAGAAGTACGCAGATCAAGGCGAAATAGAAAAGAGCAAATAT
GTCAAGGAAATGGCAAAATACCGTGCGCAACAGGAGTCCTCGAACCACGGCGACGCGAAA
CGCCAAAAAATCGAGAAACCGGCTGCGTCGTCGTCCGCTAGCTCGAGCGAGAGCGAAAGC
GAACCGGAAAGTGATTGAGAATCACCCCGTGCTCGCTGTCAAGCTACAACGATGCTCCCT
GTGGTGTATATACATTTTACAATCTAATTGCCATGGCATAAAAAAAACAACCTAATAACT
GTTTTATCAGCAAGAAATTTAAGGAAAACACACTTTTATACGCTGTTGCCAAACTTTTAT
TTTGATTTTTCACGTTTTATCTTGAAAAAGAGAAATAATTTCAACATGTTTTTCCCCGCT
AATTTTCAGTCCAATTTCGCTGTTGTTTTTTCTGTTCCCGTTTATTTTTTTTCTGTTGTA
CATAGTGATAACGTTGCACATGTTACAGCAGTTTTGTTACTTTCATTAACTCTACAACAT
GGGCCCAATAGATAAAAAAGTCGCGCGATT
| Gene3D |
HMG_box_dom_sf (IPR036910) - T[1-82] 4.9E-29 - T[84-184] 4.0E-29 |
| SUPERFAMILY |
HMG_box_dom_sf (IPR036910) - T[4-82] 8.77E-22 - T[87-170] 3.53E-26 |
| Pfam |
HMG_box_dom (IPR009071) - T[7-81] 2.1E-19 - T[100-168] 2.4E-20 |
| SMART |
HMG_box_dom (IPR009071) - T[9-83] 1.7E-16 - T[99-169] 7.0E-17 |
| ProSiteProfiles |
HMG_box_dom (IPR009071) - T[10-82] 15.957 - T[100-168] 18.28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMGB1_HUMAN | 56.886 % | 184 | 5.24E-59 |
| HMGB2_HUMAN | 54.118 % | 173 | 1.01E-54 |
| HGB1A_HUMAN | 53.293 % | 170 | 1.0E-53 |