- Transcript 'Moocul.CG.ELv1_2.S13...' >
- Transcript 'Cisavi.CG.ENS81.R14....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R14.680078-702248.17513.t
Possible name(s)
LAMA1; LAMA2; LAMC3
Gene model
Location
R14 [680,080 / 687,806]
Amino acid sequence
Length: 428
>Cisavi.CG.ENS81.R14.680078-702248.17513.p
LFPSVVNLASHAEITSNATCGERGPDKFCKLVQHVDRRTDRGQQCGICDQFSRNPSERHA
VENAIDGRGDRWWQSPTIDQGYQYHRVTLTLDLKQVFQVAYVIIKAANSPRPGNWILEKS
TDGVTWSPWQYFATSDRECLLKYGKVASQLGAPNYKTDSEVMCTTYFSRLNPFQNGEIHV
SLINGRPSAENPSFELVDFTSARYIRLRLQKIRTLHGDLMTLSIGSTQNDPSVTRRYYYS
IKDISIGGMCICYGHASTCPTNTQNGLFHCACEHNTVGFNCERCAPGFHQYKWMPGNNGF
QCEECNCHGHATECYYDPAVNERGDSLNTRGEYIGGGVCVGCRDGTAGINCQSCVDGMYR
PLDVEADSSHPCLPCNCNAYDIDHIDAENDLFPGSCYCKVGYTGQQCDKCAFGYTGFPYC
EPCPCNTS
Nucleotide sequence
Length: 1,284
>Cisavi.CG.ENS81.R14.680078-702248.17513.t
CTATTTCCTTCGGTGGTTAATTTGGCTAGTCACGCTGAAATAACGAGCAACGCAACATGC
GGGGAGAGGGGGCCGGATAAATTTTGTAAACTTGTCCAGCACGTAGATAGAAGGACAGAC
CGAGGTCAACAATGTGGGATATGCGACCAATTTAGCCGAAACCCAAGTGAAAGACACGCC
GTTGAAAATGCAATTGACGGCAGAGGGGACCGGTGGTGGCAAAGTCCGACCATTGACCAG
GGATATCAATATCACAGAGTGACCCTAACTCTAGATTTAAAACAGGTATTCCAGGTTGCT
TACGTAATTATCAAAGCGGCTAATTCACCGCGTCCCGGAAACTGGATTCTAGAAAAGTCG
ACTGATGGCGTCACATGGTCTCCTTGGCAATATTTTGCTACCTCAGATAGGGAATGCTTA
TTAAAATATGGGAAAGTTGCCTCCCAACTTGGAGCTCCGAATTACAAGACCGATAGCGAA
GTGATGTGCACAACATACTTTTCGAGACTCAACCCATTCCAGAACGGAGAAATACATGTG
TCGCTGATTAACGGACGACCAAGTGCTGAAAACCCGTCTTTTGAACTGGTGGACTTCACT
TCAGCAAGATACATTCGTTTGCGTCTTCAAAAAATTCGAACTTTGCACGGAGATCTAATG
ACGCTGAGTATTGGCTCAACGCAAAACGACCCGTCGGTTACAAGAAGATATTACTACTCG
ATCAAAGACATCAGTATAGGAGGGATGTGCATATGCTACGGACATGCAAGTACTTGTCCT
ACGAACACACAGAACGGGTTATTTCATTGCGCGTGCGAGCACAATACAGTTGGTTTCAAC
TGTGAAAGATGTGCGCCGGGATTTCACCAATACAAATGGATGCCGGGAAACAATGGCTTC
CAATGTGAAGAGTGCAACTGCCACGGCCACGCTACGGAATGCTATTACGATCCGGCTGTG
AATGAAAGAGGAGACAGTTTAAACACACGTGGAGAGTACATCGGCGGAGGAGTGTGCGTC
GGATGCAGAGATGGAACTGCCGGAATTAACTGCCAATCTTGTGTGGACGGTATGTATCGG
CCTCTTGATGTTGAAGCGGACTCATCACACCCATGTCTTCCTTGCAATTGCAACGCGTAT
GACATTGATCACATTGACGCAGAAAATGATTTATTCCCGGGATCATGTTATTGCAAAGTT
GGTTACACTGGGCAACAATGCGACAAATGCGCGTTTGGCTACACCGGATTCCCCTACTGC
GAACCTTGTCCGTGCAATACATCT
| ProSiteProfiles |
Laminin_N (IPR008211) - T[1-249] 50.626 |
| Gene3D |
Laminin_N_sf (IPR038684) - T[1-272] 4.5E-88 |
| SMART |
Laminin_N (IPR008211) - T[1-248] 2.1E-105 |
| Pfam |
Laminin_N (IPR008211) - T[2-248] 9.7E-72 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[57-136] 6.38E-10 |
| SMART |
Laminin_EGF (IPR002049) - T[250-302] 1.4E-4 - T[305-372] 3.3E-4 - T[375-420] 0.01 |
| Pfam |
Laminin_EGF (IPR002049) - T[250-297] 2.4E-5 - T[305-360] 8.5E-4 - T[375-425] 7.1E-4 |
| ProSitePatterns |
Laminin_EGF (IPR002049) - T[270-302] . - T[396-425] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LAMA1_HUMAN | 58.219 % | 528 | 7.62E-170 |
| LAMA2_HUMAN | 56.651 % | 518 | 1.36E-166 |
| LAMA3_HUMAN | 49.091 % | 405 | 4.39E-127 |