- Clone 'citb095h21' >
- Clone 'cien51945' >
- Clone 'ciad051j18' >
- Transcript 'Cisavi.CG.ENS81.R148...' >
- Transcript 'Cisavi.CG.ENS81.R148...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R148.436988-458312.10143.t
Possible name(s)
SLIT1; SLIT2; SLIT3
Gene model
Location
R148 [436,987 / 458,312]
Amino acid sequence
Length: 1,398
>Cisavi.CG.ENS81.R148.436988-458312.10143.p
QLDLNLITCIQDQTFRPLRRLEVLTLNNNNLTHVSPLVLRGKMPHLRTLRLHSNPIRCNC
HMAWLADWLSDRPTMAVFTQCAEPISLRGLNLASADRSEFLCNEITAQRAPTCEITSCPA
ACICINGIVDCRDRGLTVLPATFPLDTTELRLEQNRIQIIPSFSFSSYPQLRRIDLSNNE
IKEIERDAFDGLSQLSSLVMYGNKITSLPAGIFTHMHNLQMLLMNANKIKCLRQDVFSGL
RSLTLLSLYDNKLQSISRGTFANLRSIETMHLAQNPFICDCHMRWLVNYVKKYKVETSGA
KCAGPRRLAGKKISSAKTRKMRCNGKNIIFSASGIAAECIPEAECPNQCRCDGSIVDCSR
QALTAIPDNIPPYASELFLNHNRIQMITSVGLFQKLRNLKKIDLSNNQLTAIEDGAFSGA
GSVLELWLNHNVLTDIRGSMFSGLNNLRTLMVRNNHLMCIGNHTFAGLSTVRHLDLYSNQ
IATILSGAFATMSSLSTLNLLSNPLDCNCHLSWLSTWLRRSPVSSGNPRCAEPRFLREFP
VADINPRDFRCSTEQEARAAPTCLPVQKCPEQCTCEGTIVRCANTGLTSVPVDDIPHDVT
ELYLEMNDIREIPASIKKFIYLTTLDLSNNDISSINDWMFSNLTRLSTLLLAYNRLRCIP
PKAFTGLRSLRILSLHSNELSSLPEGAFDDLTSLSHVGFGANPWYCDCNLRWFSQWVKSD
FFEAGIARCSGPPRMAGRLLLSSSLETFVCQGPLDIAIAVKCNPCLSSPCQHNSTCGVHP
TDYYQCTCQPGFKGRHCEMPIDPCILEPCHNGARCIARDEAVYNCECVVGFSGDRCENNI
NDCTATSCPVSNATCIDGVNTFTCRCPVGWTGTNCNEQIPDPCTLEQPCQHGGSCVLLQE
IDAISYRCDCSSGYRGVNCSERFDPCLSHKCENNGLCEINQQSPIGYQCNCVGEYRGQYC
TFPMDIVDVLQDDPCSDNDCQHGSECYIEDGRDYKCRCLPGYAGNKCQQLVSLSFQRNGS
FIETQQQGLVDTNFTFIISTTQLNGVLMYDGDSTGSSREHLAIEFFTGHVRVSYDLGISP
GSTIYSQIPINDGTPHKVELIIRDRLVSLKIDNGKTIKETMTSSMTSSSEVIGSEALSPL
FIGGIRADLLRSARRFWHIRNTTSFKGCIHGLYINQSQLEFNDLMPVDDLISDIRPGCQG
DGGSCSAARCTHGQCVFVAGRGITCRCDAGYTGESCNTRATPCATNACQHGTCRPNGASY
TCECEKGMLHGRHCETLDYCAGVDCRRGHCVSTDIGYQCKCKKHFTGRHCQIRIRSCPGT
RIKQYYQVSRPYTICQWNDQMSEQKTRASVFGQSDAASTSCCKPLRVQSKRIRMKCSDGS
LIHQVLQKVRKCGCQSCS
Nucleotide sequence
Length: 4,197
>Cisavi.CG.ENS81.R148.436988-458312.10143.t
CAACTTGACCTGAACTTGATTACTTGCATACAAGACCAAACCTTCCGGCCCCTTCGAAGA
TTGGAGGTTCTCACTTTAAATAACAACAACCTAACACACGTGTCACCATTGGTACTTCGG
GGGAAAATGCCACATCTTAGAACTCTACGTCTTCACTCCAATCCGATCAGATGTAACTGT
CACATGGCCTGGCTTGCTGATTGGTTATCAGACCGACCGACCATGGCTGTATTTACCCAA
TGTGCCGAACCGATTAGTTTGCGAGGATTGAACCTGGCGTCAGCTGACCGGAGCGAATTT
CTTTGCAACGAAATCACTGCCCAGCGTGCACCCACATGTGAAATAACATCATGTCCAGCA
GCATGTATTTGTATCAATGGCATTGTGGATTGCAGAGACCGTGGCCTCACAGTATTGCCC
GCCACCTTTCCCCTTGATACAACTGAACTGCGCCTTGAGCAAAATCGAATTCAGATAATT
CCAAGTTTTTCCTTTTCATCGTACCCACAACTTCGCAGAATCGATTTGAGCAACAACGAA
ATTAAAGAAATCGAGCGAGATGCTTTTGATGGACTTTCACAACTATCTTCATTAGTTATG
TACGGAAACAAGATTACATCACTGCCAGCTGGTATTTTTACTCACATGCACAACCTGCAG
ATGCTATTAATGAATGCAAATAAGATCAAATGTTTGCGGCAAGATGTGTTCAGTGGATTG
CGTTCTCTCACATTACTATCATTATATGACAACAAACTGCAGTCCATATCCAGGGGAACC
TTTGCTAACCTACGATCCATAGAAACAATGCACTTGGCTCAAAATCCGTTTATCTGTGAC
TGCCATATGAGGTGGTTGGTGAATTATGTAAAAAAGTACAAAGTTGAAACATCAGGTGCA
AAATGTGCTGGTCCACGACGATTAGCTGGCAAAAAAATATCTTCTGCCAAAACAAGAAAA
ATGAGATGCAATGGTAAAAATATCATTTTTTCTGCATCGGGTATAGCAGCAGAATGTATA
CCAGAAGCTGAATGCCCCAACCAATGTCGATGTGATGGATCTATTGTGGATTGCTCAAGA
CAAGCGCTCACTGCTATTCCTGATAACATTCCACCTTATGCTTCTGAATTATTTTTGAAC
CACAATCGGATACAGATGATAACAAGTGTCGGTTTGTTTCAAAAATTAAGAAATTTGAAG
AAAATTGACCTTTCTAACAACCAGCTTACTGCAATCGAGGATGGAGCTTTTTCTGGGGCT
GGGAGTGTTCTAGAACTTTGGTTGAACCACAATGTGCTCACTGATATTCGGGGATCAATG
TTCAGTGGACTTAACAATCTACGTACTTTAATGGTTCGAAACAACCATCTCATGTGCATT
GGGAACCATACATTTGCTGGGCTATCCACTGTACGACATCTTGACCTGTACTCCAACCAG
ATAGCCACCATTCTTAGTGGGGCATTCGCCACTATGTCATCACTAAGCACACTAAATCTT
TTATCGAATCCACTCGACTGTAACTGCCACTTATCTTGGTTGTCAACATGGTTACGACGA
AGTCCCGTCTCATCAGGCAACCCACGATGTGCTGAACCCCGATTTCTAAGGGAATTCCCC
GTAGCTGATATTAACCCCAGGGATTTCCGATGCAGCACAGAACAAGAGGCACGGGCGGCA
CCAACGTGTCTGCCTGTCCAAAAGTGCCCAGAACAATGTACATGTGAAGGAACTATTGTT
CGATGCGCCAACACAGGGTTAACATCGGTCCCTGTAGACGACATACCCCATGATGTCACT
GAACTATACTTGGAGATGAATGATATTAGGGAAATCCCCGCATCAATAAAGAAATTTATC
TATCTCACTACTTTGGATCTGAGCAACAATGACATATCCAGCATAAATGATTGGATGTTT
TCCAACTTAACACGATTATCTACTTTGCTATTGGCATACAACCGATTGCGGTGTATTCCA
CCCAAAGCATTCACCGGTCTCCGATCACTCAGGATACTTTCCCTTCACAGTAATGAACTT
TCAAGTTTACCGGAAGGTGCATTTGATGACCTGACTTCCCTGTCCCATGTGGGATTTGGG
GCCAATCCTTGGTACTGTGATTGCAATCTACGTTGGTTCAGCCAGTGGGTGAAATCAGAT
TTCTTCGAAGCAGGAATCGCACGATGCTCTGGTCCCCCTCGGATGGCTGGCCGCCTTCTT
CTCTCATCGTCACTTGAAACTTTTGTGTGTCAAGGACCACTGGACATCGCCATAGCTGTG
AAATGTAACCCGTGTCTGTCCTCTCCATGCCAGCACAACTCAACTTGTGGTGTGCACCCC
ACTGATTACTACCAATGCACATGCCAACCAGGTTTCAAAGGGAGGCATTGTGAGATGCCG
ATAGACCCTTGCATATTGGAGCCATGTCACAACGGTGCTAGATGTATAGCACGAGATGAG
GCTGTATATAATTGTGAGTGTGTGGTTGGATTCAGTGGCGATAGATGTGAGAACAATATC
AATGACTGCACAGCTACCTCATGCCCAGTGTCGAATGCAACATGTATTGATGGGGTCAAC
ACCTTTACGTGCCGCTGCCCAGTGGGCTGGACTGGGACCAATTGTAATGAACAGATACCA
GACCCATGCACATTAGAACAACCATGCCAACATGGTGGATCTTGTGTCTTGTTACAAGAA
ATCGATGCTATATCTTACAGATGTGACTGTAGCAGTGGGTACCGTGGGGTGAACTGTAGT
GAACGTTTTGATCCCTGTCTCAGCCACAAGTGCGAGAACAATGGCCTCTGTGAGATTAAC
CAACAATCGCCCATCGGATACCAGTGCAATTGTGTAGGGGAATATCGAGGCCAATACTGC
ACATTTCCTATGGATATAGTCGATGTGTTGCAAGATGACCCGTGTTCGGACAATGATTGT
CAGCATGGATCTGAATGTTATATCGAGGACGGGAGAGATTATAAATGTCGCTGTTTGCCG
GGCTATGCTGGGAATAAGTGTCAGCAGCTTGTAAGCCTCAGTTTCCAACGAAACGGGAGT
TTCATAGAGACCCAGCAGCAAGGACTCGTCGACACCAACTTCACATTCATCATCTCAACC
ACACAGCTAAACGGAGTTCTAATGTACGATGGGGACAGCACTGGGTCATCTAGGGAACAT
CTTGCCATTGAGTTTTTCACCGGTCATGTCCGTGTCAGCTACGATTTAGGGATTTCCCCA
GGATCCACCATCTACAGTCAGATTCCGATCAATGATGGAACTCCACATAAGGTTGAGCTG
ATCATTCGTGACCGCCTGGTGTCACTAAAGATTGACAACGGAAAAACGATCAAGGAAACC
ATGACATCATCAATGACATCATCAAGCGAGGTCATAGGGTCGGAAGCTTTATCCCCACTC
TTCATCGGAGGAATCAGAGCTGACCTACTCAGGTCAGCAAGAAGGTTCTGGCACATCAGG
AACACAACCAGTTTTAAAGGTTGTATCCATGGTCTCTACATCAACCAATCCCAGCTGGAG
TTCAATGATCTCATGCCTGTTGATGATCTCATCAGTGACATCAGGCCTGGTTGCCAAGGA
GATGGAGGGTCATGCTCGGCTGCACGTTGTACCCATGGACAATGTGTCTTTGTAGCAGGA
AGAGGAATAACCTGTAGATGCGATGCAGGGTATACAGGTGAGAGTTGCAACACTAGGGCG
ACACCATGTGCAACGAATGCATGCCAACACGGAACATGTAGACCGAACGGGGCATCGTAT
ACCTGCGAGTGCGAGAAAGGTATGTTGCACGGCAGACATTGCGAAACACTTGATTATTGT
GCTGGTGTAGATTGTAGAAGAGGGCACTGTGTGTCAACTGACATTGGATACCAGTGCAAA
TGTAAGAAGCACTTTACTGGGAGGCATTGCCAAATTAGAATACGATCTTGTCCTGGTACG
AGGATCAAGCAATACTACCAAGTGAGTCGTCCGTACACGATCTGTCAATGGAATGACCAG
ATGTCGGAGCAGAAGACTCGTGCATCTGTGTTTGGTCAATCGGACGCTGCTTCTACATCG
TGTTGCAAACCACTACGTGTACAAAGCAAACGTATTCGCATGAAATGCAGCGATGGATCT
CTGATACACCAAGTTCTGCAAAAAGTACGAAAATGCGGATGTCAGTCTTGCTCTTGA
| Gene3D |
LRR_dom_sf (IPR032675) - T[1-107] 1.0E-22 - T[115-330] 1.3E-65 - T[342-560] 4.2E-62 - T[566-753] 1.2E-57 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[2-56] 2.8E-8 - T[148-205] 1.1E-12 - T[218-276] 5.4E-12 - T[397-457] 8.9E-14 - T[645-696] 2.8E-12 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[18-41] 0.022 - T[43-66] 110.0 - T[148-167] 210.0 - T[168-191] 0.98 - T[192-215] 0.0057 - T[216-239] 2.2 - T[240-263] 0.0035 - T[396-419] 2.4E-5 - T[421-443] 140.0 - T[444-467] 0.43 - T[468-491] 3.3 - T[619-642] 14.0 - T[643-666] 0.0023 - T[667-690] 1.2E-5 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[20-41] 7.288 - T[45-66] 5.671 - T[146-167] 5.656 - T[170-191] 7.319 - T[194-215] 5.918 - T[218-239] 5.202 - T[242-263] 6.48 - T[373-394] 4.832 - T[398-419] 7.897 - T[422-443] 5.833 - T[446-467] 6.01 - T[470-491] 5.871 - T[494-515] 5.895 - T[598-619] 5.332 - T[621-642] 8.259 - T[645-666] 6.472 - T[669-690] 7.204 |
| SMART |
Cys-rich_flank_reg_C (IPR000483) - T[54-103] 1.8E-5 - T[275-324] 1.9E-6 - T[503-552] 3.1E-8 - T[702-751] 1.0E-13 |
| Pfam |
Cys-rich_flank_reg_C (IPR000483) - T[78-102] 2.3 - T[300-313] 21.0 - T[527-552] 8.3E-4 - T[727-750] 0.028 |
| SMART |
LRRNT (IPR000372) - T[117-149] 7.6E-7 - T[344-376] 1.2E-5 - T[568-601] 1.9E-4 |
| Pfam |
LRRNT (IPR000372) - T[118-144] 4.3E-6 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[761-798] 0.18 - T[800-837] 0.016 - T[839-876] 5.9E-7 - T[881-920] 0.75 - T[971-1008] 0.92 - T[1243-1275] 0.03 - T[1276-1311] 0.022 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[763-798] 16.582 - T[800-837] 19.917 - T[839-876] 17.39 - T[879-920] 18.554 - T[922-961] 15.145 - T[971-1008] 18.317 - T[1201-1237] 12.265 - T[1239-1275] 10.092 - T[1276-1311] 12.561 |
| SMART |
EGF-like_dom (IPR000742) - T[764-798] 0.0031 - T[803-837] 9.7E-6 - T[842-876] 0.001 - T[882-920] 1.9E-6 - T[925-961] 0.1 - T[974-1008] 6.0E-5 - T[1204-1237] 0.005 - T[1242-1275] 9.6E-4 - T[1279-1311] 0.0023 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[786-797] . - T[786-797] . - T[825-836] . - T[825-836] . - T[864-875] . - T[864-875] . - T[908-919] . - T[908-919] . - T[949-960] . - T[996-1007] . - T[996-1007] . - T[1225-1236] . - T[1225-1236] . - T[1299-1310] . |
| Pfam |
EGF-like_dom (IPR000742) - T[807-835] 1.5E-5 - T[852-873] 1.2E-5 - T[883-917] 8.1E-7 - T[975-1005] 3.0E-5 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[839-864] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[855-866] . |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[996-1198] 4.55E-30 |
| ProSiteProfiles |
Laminin_G (IPR001791) - T[1011-1198] 31.754 |
| SMART |
Laminin_G (IPR001791) - T[1030-1177] 3.4E-26 |
| Pfam |
Laminin_G (IPR001791) - T[1038-1176] 4.5E-21 |
| ProSiteProfiles |
Cys_knot_C (IPR006207) - T[1301-1398] 9.302 |
| ProSitePatterns |
Cys_knot_C (IPR006207) - T[1361-1397] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SLIT1_HUMAN | 46.436 % | 1224 | 0 |
| SLIT3_HUMAN | 44.011 % | 1175 | 0 |
| SLIT2_HUMAN | 45.718 % | 1245 | 0 |