- Transcript 'Moocci.CG.ELv1_2.S25...' >
- Transcript 'KH2012:KH.L154.61.v1...' >
- Transcript 'Cisavi.CG.ENS81.R148...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R148.436988-458312.10145.t
Possible name(s)
SLIT1; SLIT2; SLIT3
Gene model
Location
R148 [437,470 / 458,312]
Amino acid sequence
Length: 1,247
>Cisavi.CG.ENS81.R148.436988-458312.10145.p
QLDLNLITCIQDQTFRPLRRLEVLTLNNNNLTHVSPLVLRGKMPHLRTLRLHSNPIRCNC
HMAWLADWLSDRPTMAVFTQCAEPISLRGLNLASADRSEFLCNEITAQRAPTCEITSCPA
ACICINGIVDCRDRGLTVLPATFPLDTTELRLEQNRIQIIPSFSFSSYPQLRRIDLSNNE
IKEIERDAFDGLSQLSSLVMYGNKITSLPAGIFTHMHNLQMLLMNANKIKCLRQDVFSGL
RSLTLLSLYDNKLQSISRGTFANLRSIETMHLAQNPFICDCHMRWLVNYVKKYKVETSGA
KCAGPRRLAGKKISSAKTRKMRCNGKNIIFSYIYTFCWFGVLSINLLENTAECIPEAECP
NQCRCDGSIVDCSRQALTAIPDNIPPYASELFLNHNRIQMITSVGLFQKLRNLKKIDLSN
NQLTAIEDGAFSGAGSVLELWLNHNVLTDIRGSMFSGLNNLRTLMVRNNHLMCIGNHTFA
GLSTVRHLDLYSNQIATILSGAFATMSSLSTLNLLSNPLDCNCHLSWLSTWLRRSPVSSG
NPRCAEPRFLREFPVADINPRDFRCSTEQEARAAPTCLPVQKCPEQCTCEGTIVRCANTG
LTSVPVDDIPHDVTELYLEMNDIREIPASIKKFIYLTTLDLSNNDISSINDWMFSNLTRL
STLLLAYNRLRCIPPKAFTGLRSLRILSLHSNELSSLPEGAFDDLTSLSHVGFGANPWYC
DCNLRWFSQWVKSDFFEAGIARCSGPPRMAGRLLLSSSLETFVCQGPLDIAIAVKCNPCL
SSPCQHNSTCGVHPTDYYQCTCQPGFKGRHCEMPIDPCILEPCHNGARCIARDEAVYNCE
CVVGFSGDRCENNINDCTATSCPVSNATCIDGVNTFTCRCPVGWTGTNCNEQIPDPCTLE
QPCQHGGSCVLLQEIDAISYRCDCSSGYRGVNCSERFDPCLSHKCENNGLCEINQQSPIG
YQCNCVGEYRGQYCTFPMDIVDVLQDDPCSDNDCQHGSECYIEDGRDYKCRCLPGYAGNK
CQQLVSLSFQRNGSFIETQQQGLVDTNFTFIISTTQLNGVLMYDGDSTGSSREHLAIEFF
TGHVRVSYDLGISPGSTIYSQIPINDGTPHKVELIIRDRLVSLKIDNGKTIKETMTSSMT
SSSEVIGSEALSPLFIGGIRADLLRSARRFWHIRNTTSFKGCIHGLYINQSQLEFNDLMP
VDDLISDIRPGCQGDGGSCSAARHCVSTDIGYQCKCKKHFTGRHCQI
Nucleotide sequence
Length: 3,741
>Cisavi.CG.ENS81.R148.436988-458312.10145.t
CAACTTGACCTGAACTTGATTACTTGCATACAAGACCAAACCTTCCGGCCCCTTCGAAGA
TTGGAGGTTCTCACTTTAAATAACAACAACCTAACACACGTGTCACCATTGGTACTTCGG
GGGAAAATGCCACATCTTAGAACTCTACGTCTTCACTCCAATCCGATCAGATGTAACTGT
CACATGGCCTGGCTTGCTGATTGGTTATCAGACCGACCGACCATGGCTGTATTTACCCAA
TGTGCCGAACCGATTAGTTTGCGAGGATTGAACCTGGCGTCAGCTGACCGGAGCGAATTT
CTTTGCAACGAAATCACTGCCCAGCGTGCACCCACATGTGAAATAACATCATGTCCAGCA
GCATGTATTTGTATCAATGGCATTGTGGATTGCAGAGACCGTGGCCTCACAGTATTGCCC
GCCACCTTTCCCCTTGATACAACTGAACTGCGCCTTGAGCAAAATCGAATTCAGATAATT
CCAAGTTTTTCCTTTTCATCGTACCCACAACTTCGCAGAATCGATTTGAGCAACAACGAA
ATTAAAGAAATCGAGCGAGATGCTTTTGATGGACTTTCACAACTATCTTCATTAGTTATG
TACGGAAACAAGATTACATCACTGCCAGCTGGTATTTTTACTCACATGCACAACCTGCAG
ATGCTATTAATGAATGCAAATAAGATCAAATGTTTGCGGCAAGATGTGTTCAGTGGATTG
CGTTCTCTCACATTACTATCATTATATGACAACAAACTGCAGTCCATATCCAGGGGAACC
TTTGCTAACCTACGATCCATAGAAACAATGCACTTGGCTCAAAATCCGTTTATCTGTGAC
TGCCATATGAGGTGGTTGGTGAATTATGTAAAAAAGTACAAAGTTGAAACATCAGGTGCA
AAATGTGCTGGTCCACGACGATTAGCTGGCAAAAAAATATCTTCTGCCAAAACAAGAAAA
ATGAGATGCAATGGTAAAAATATCATTTTTTCGTATATTTATACATTTTGCTGGTTTGGA
GTATTGTCTATTAACTTGCTCGAAAACACAGCAGAATGTATACCAGAAGCTGAATGCCCC
AACCAATGTCGATGTGATGGATCTATTGTGGATTGCTCAAGACAAGCGCTCACTGCTATT
CCTGATAACATTCCACCTTATGCTTCTGAATTATTTTTGAACCACAATCGGATACAGATG
ATAACAAGTGTCGGTTTGTTTCAAAAATTAAGAAATTTGAAGAAAATTGACCTTTCTAAC
AACCAGCTTACTGCAATCGAGGATGGAGCTTTTTCTGGGGCTGGGAGTGTTCTAGAACTT
TGGTTGAACCACAATGTGCTCACTGATATTCGGGGATCAATGTTCAGTGGACTTAACAAT
CTACGTACTTTAATGGTTCGAAACAACCATCTCATGTGCATTGGGAACCATACATTTGCT
GGGCTATCCACTGTACGACATCTTGACCTGTACTCCAACCAGATAGCCACCATTCTTAGT
GGGGCATTCGCCACTATGTCATCACTAAGCACACTAAATCTTTTATCGAATCCACTCGAC
TGTAACTGCCACTTATCTTGGTTGTCAACATGGTTACGACGAAGTCCCGTCTCATCAGGC
AACCCACGATGTGCTGAACCCCGATTTCTAAGGGAATTCCCCGTAGCTGATATTAACCCC
AGGGATTTCCGATGCAGCACAGAACAAGAGGCACGGGCGGCACCAACGTGTCTGCCTGTC
CAAAAGTGCCCAGAACAATGTACATGTGAAGGAACTATTGTTCGATGCGCCAACACAGGG
TTAACATCGGTCCCTGTAGACGACATACCCCATGATGTCACTGAACTATACTTGGAGATG
AATGATATTAGGGAAATCCCCGCATCAATAAAGAAATTTATCTATCTCACTACTTTGGAT
CTGAGCAACAATGACATATCCAGCATAAATGATTGGATGTTTTCCAACTTAACACGATTA
TCTACTTTGCTATTGGCATACAACCGATTGCGGTGTATTCCACCCAAAGCATTCACCGGT
CTCCGATCACTCAGGATACTTTCCCTTCACAGTAATGAACTTTCAAGTTTACCGGAAGGT
GCATTTGATGACCTGACTTCCCTGTCCCATGTGGGATTTGGGGCCAATCCTTGGTACTGT
GATTGCAATCTACGTTGGTTCAGCCAGTGGGTGAAATCAGATTTCTTCGAAGCAGGAATC
GCACGATGCTCTGGTCCCCCTCGGATGGCTGGCCGCCTTCTTCTCTCATCGTCACTTGAA
ACTTTTGTGTGTCAAGGACCACTGGACATCGCCATAGCTGTGAAATGTAACCCGTGTCTG
TCCTCTCCATGCCAGCACAACTCAACTTGTGGTGTGCACCCCACTGATTACTACCAATGC
ACATGCCAACCAGGTTTCAAAGGGAGGCATTGTGAGATGCCGATAGACCCTTGCATATTG
GAGCCATGTCACAACGGTGCTAGATGTATAGCACGAGATGAGGCTGTATATAATTGTGAG
TGTGTGGTTGGATTCAGTGGCGATAGATGTGAGAACAATATCAATGACTGCACAGCTACC
TCATGCCCAGTGTCGAATGCAACATGTATTGATGGGGTCAACACCTTTACGTGCCGCTGC
CCAGTGGGCTGGACTGGGACCAATTGTAATGAACAGATACCAGACCCATGCACATTAGAA
CAACCATGCCAACATGGTGGATCTTGTGTCTTGTTACAAGAAATCGATGCTATATCTTAC
AGATGTGACTGTAGCAGTGGGTACCGTGGGGTGAACTGTAGTGAACGTTTTGATCCCTGT
CTCAGCCACAAGTGCGAGAACAATGGCCTCTGTGAGATTAACCAACAATCGCCCATCGGA
TACCAGTGCAATTGTGTAGGGGAATATCGAGGCCAATACTGCACATTTCCTATGGATATA
GTCGATGTGTTGCAAGATGACCCGTGTTCGGACAATGATTGTCAGCATGGATCTGAATGT
TATATCGAGGACGGGAGAGATTATAAATGTCGCTGTTTGCCGGGCTATGCTGGGAATAAG
TGTCAGCAGCTTGTAAGCCTCAGTTTCCAACGAAACGGGAGTTTCATAGAGACCCAGCAG
CAAGGACTCGTCGACACCAACTTCACATTCATCATCTCAACCACACAGCTAAACGGAGTT
CTAATGTACGATGGGGACAGCACTGGGTCATCTAGGGAACATCTTGCCATTGAGTTTTTC
ACCGGTCATGTCCGTGTCAGCTACGATTTAGGGATTTCCCCAGGATCCACCATCTACAGT
CAGATTCCGATCAATGATGGAACTCCACATAAGGTTGAGCTGATCATTCGTGACCGCCTG
GTGTCACTAAAGATTGACAACGGAAAAACGATCAAGGAAACCATGACATCATCAATGACA
TCATCAAGCGAGGTCATAGGGTCGGAAGCTTTATCCCCACTCTTCATCGGAGGAATCAGA
GCTGACCTACTCAGGTCAGCAAGAAGGTTCTGGCACATCAGGAACACAACCAGTTTTAAA
GGTTGTATCCATGGTCTCTACATCAACCAATCCCAGCTGGAGTTCAATGATCTCATGCCT
GTTGATGATCTCATCAGTGACATCAGGCCTGGTTGCCAAGGAGATGGAGGGTCATGCTCG
GCTGCACGGCACTGTGTGTCAACTGACATTGGATACCAGTGCAAATGTAAGAAGCACTTT
ACTGGGAGGCATTGCCAAATT
| Gene3D |
LRR_dom_sf (IPR032675) - T[1-107] 8.6E-23 - T[115-331] 1.2E-65 - T[356-574] 3.5E-62 - T[580-767] 1.0E-57 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[2-56] 2.4E-8 - T[148-205] 9.5E-13 - T[218-276] 4.8E-12 - T[411-471] 6.8E-14 - T[659-710] 2.3E-12 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[18-41] 0.022 - T[43-66] 110.0 - T[148-167] 210.0 - T[168-191] 0.98 - T[192-215] 0.0057 - T[216-239] 2.2 - T[240-263] 0.0035 - T[410-433] 2.4E-5 - T[435-457] 140.0 - T[458-481] 0.43 - T[482-505] 3.3 - T[633-656] 14.0 - T[657-680] 0.0023 - T[681-704] 1.2E-5 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[20-41] 7.288 - T[45-66] 5.671 - T[146-167] 5.656 - T[170-191] 7.319 - T[194-215] 5.918 - T[218-239] 5.202 - T[242-263] 6.48 - T[387-408] 4.832 - T[412-433] 7.897 - T[436-457] 5.833 - T[460-481] 6.01 - T[484-505] 5.871 - T[508-529] 5.895 - T[612-633] 5.332 - T[635-656] 8.259 - T[659-680] 6.472 - T[683-704] 7.204 |
| SMART |
Cys-rich_flank_reg_C (IPR000483) - T[54-103] 1.8E-5 - T[275-324] 1.9E-6 - T[517-566] 3.1E-8 - T[716-765] 1.0E-13 |
| Pfam |
Cys-rich_flank_reg_C (IPR000483) - T[78-102] 2.0 - T[300-313] 18.0 - T[541-566] 7.3E-4 - T[741-764] 0.024 |
| SMART |
LRRNT (IPR000372) - T[117-149] 7.6E-7 - T[358-390] 1.2E-5 - T[582-615] 1.9E-4 |
| Pfam |
LRRNT (IPR000372) - T[118-144] 3.8E-6 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[775-812] 0.18 - T[814-851] 0.016 - T[853-890] 5.9E-7 - T[895-934] 0.75 - T[985-1022] 0.92 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[777-812] 16.582 - T[814-851] 19.917 - T[853-890] 17.39 - T[893-934] 18.554 - T[936-975] 15.145 - T[985-1022] 18.317 - T[1208-1246] 12.05 |
| SMART |
EGF-like_dom (IPR000742) - T[778-812] 0.0031 - T[817-851] 9.7E-6 - T[856-890] 0.001 - T[896-934] 1.9E-6 - T[939-975] 0.1 - T[988-1022] 6.0E-5 - T[1211-1246] 0.75 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[800-811] . - T[800-811] . - T[839-850] . - T[839-850] . - T[878-889] . - T[878-889] . - T[922-933] . - T[922-933] . - T[963-974] . - T[1010-1021] . - T[1010-1021] . - T[1234-1245] . |
| Pfam |
EGF-like_dom (IPR000742) - T[821-849] 1.3E-5 - T[866-887] 1.0E-5 - T[897-931] 7.1E-7 - T[989-1019] 2.7E-5 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[853-878] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[869-880] . |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[1010-1212] 3.76E-30 |
| ProSiteProfiles |
Laminin_G (IPR001791) - T[1025-1212] 31.754 |
| SMART |
Laminin_G (IPR001791) - T[1044-1191] 3.4E-26 |
| Pfam |
Laminin_G (IPR001791) - T[1052-1190] 3.9E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SLIT1_HUMAN | 47.46 % | 1124 | 0 |
| SLIT3_HUMAN | 45.462 % | 1092 | 0 |
| SLIT2_HUMAN | 47.04 % | 1148 | 0 |