- Clone 'citb095h21' >
- Clone 'cien51945' >
- Clone 'ciad051j18' >
- Transcript 'Cisavi.CG.ENS81.R148...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R148.436988-458312.10149.t
Possible name(s)
SLIT1; SLIT2; SLIT3
Gene model
Location
R148 [439,538 / 458,240]
Amino acid sequence
Length: 1,061
>Cisavi.CG.ENS81.R148.436988-458312.10149.p
TLNNNNLTHVSPLVLRGKMPHLRTLRLHSNPIRCNCHMAWLADWLSDRPTMAVFTQCAEP
ISLRGLNLASADRSEFLCNGYERTKVEYLPSIKSKSMTIMHFSPEITAQRAPTCEITSCP
AACICINGIVDCRDRGLTVLPATFPLDTTELRLEQNRIQIIPSFSFSSYPQLRRIDLSNN
EIKEIERDAFDGLSQLSSLVMYGNKITSLPAGIFTHMHNLQMLLMNANKIKCLRQDVFSG
LRSLTLLSLYDNKLQSISRGTFANLRSIETMHLAQNPFICDCHMRWLVNYVKKYKVETSG
AKCAGPRRLAGKKISSAKTRKMRCNGKNIIFSASGIAAECIPEAECPNQCRCDGSIVDCS
RQALTAIPDNIPPYASELFLNHNRIQMITSVGLFQKLRNLKKIDLSNNQLTAIEDGAFSG
AGSVLELWLNHNVLTDIRGSMFSGLNNLRTLMVRNNHLMCIGNHTFAGLSTVRHLDLYSN
QIATILSGAFATINLLSNPLDCNCHLSWLSTWLRRSPVSSGNPRCAEPRFLREFPVADIN
PRDFRCSTEQEARAAPTCLPVQKCPEQYDIPHDVTELYLEMNDIREIPASIKKFIYLTTL
DLSNNDISSINDWMFSNLTRLSTLLLAYNRLRCIPPKAFTGLRSLRILSLHSNELSSLPE
GAFDDLTSLSHVGFGANPWYCDCNLRWFSQWVKSDFFEAGIARCSGPPRMAGRLLLSSSL
ETFVCQGPLDIAIAVKCNPCLSSPCQHNSTCGVHPTDYYQCTCQPGFKGRHCEMPIDPCI
LEPCHNGARCIARDEAVYNCECVVGFSGDRCENNINDCTATSCPVSNATCIDGVNTFTCR
CPVGWTGTNCNEQIPDPCTLEQPCQHGGSCVLLQEIDAISYRCDCSSGYRGVNCSERFDP
CLSHKCENNGLCEINQQSPIGYQCNCVGEYRGQYCTFPMDIVDVLQDDPCSDNDCQHGSE
CYIEDGRDYKCRCLPGYAGNKCQQLVSLSFQRNGSFIETQQQGLVDTNFTFIISTTQLNG
VLMYDGDSTGSSREHLAIEFFTGHVRVSYDLGISPGSTIYS
Nucleotide sequence
Length: 3,183
>Cisavi.CG.ENS81.R148.436988-458312.10149.t
ACTTTAAATAACAACAACCTAACACACGTGTCACCATTGGTACTTCGGGGGAAAATGCCA
CATCTTAGAACTCTACGTCTTCACTCCAATCCGATCAGATGTAACTGTCACATGGCCTGG
CTTGCTGATTGGTTATCAGACCGACCGACCATGGCTGTATTTACCCAATGTGCCGAACCG
ATTAGTTTGCGAGGATTGAACCTGGCGTCAGCTGACCGGAGCGAATTTCTTTGCAACGGT
TATGAACGTACAAAAGTAGAATATTTACCTTCCATTAAATCGAAGTCCATGACAATCATG
CATTTTTCACCAGAAATCACTGCCCAGCGTGCACCCACATGTGAAATAACATCATGTCCA
GCAGCATGTATTTGTATCAATGGCATTGTGGATTGCAGAGACCGTGGCCTCACAGTATTG
CCCGCCACCTTTCCCCTTGATACAACTGAACTGCGCCTTGAGCAAAATCGAATTCAGATA
ATTCCAAGTTTTTCCTTTTCATCGTACCCACAACTTCGCAGAATCGATTTGAGCAACAAC
GAAATTAAAGAAATCGAGCGAGATGCTTTTGATGGACTTTCACAACTATCTTCATTAGTT
ATGTACGGAAACAAGATTACATCACTGCCAGCTGGTATTTTTACTCACATGCACAACCTG
CAGATGCTATTAATGAATGCAAATAAGATCAAATGTTTGCGGCAAGATGTGTTCAGTGGA
TTGCGTTCTCTCACATTACTATCATTATATGACAACAAACTGCAGTCCATATCCAGGGGA
ACCTTTGCTAACCTACGATCCATAGAAACAATGCACTTGGCTCAAAATCCGTTTATCTGT
GACTGCCATATGAGGTGGTTGGTGAATTATGTAAAAAAGTACAAAGTTGAAACATCAGGT
GCAAAATGTGCTGGTCCACGACGATTAGCTGGCAAAAAAATATCTTCTGCCAAAACAAGA
AAAATGAGATGCAATGGTAAAAATATCATTTTTTCTGCATCGGGTATAGCAGCAGAATGT
ATACCAGAAGCTGAATGCCCCAACCAATGTCGATGTGATGGATCTATTGTGGATTGCTCA
AGACAAGCGCTCACTGCTATTCCTGATAACATTCCACCTTATGCTTCTGAATTATTTTTG
AACCACAATCGGATACAGATGATAACAAGTGTCGGTTTGTTTCAAAAATTAAGAAATTTG
AAGAAAATTGACCTTTCTAACAACCAGCTTACTGCAATCGAGGATGGAGCTTTTTCTGGG
GCTGGGAGTGTTCTAGAACTTTGGTTGAACCACAATGTGCTCACTGATATTCGGGGATCA
ATGTTCAGTGGACTTAACAATCTACGTACTTTAATGGTTCGAAACAACCATCTCATGTGC
ATTGGGAACCATACATTTGCTGGGCTATCCACTGTACGACATCTTGACCTGTACTCCAAC
CAGATAGCCACCATTCTTAGTGGGGCATTCGCCACTATAAATCTTTTATCGAATCCACTC
GACTGTAACTGCCACTTATCTTGGTTGTCAACATGGTTACGACGAAGTCCCGTCTCATCA
GGCAACCCACGATGTGCTGAACCCCGATTTCTAAGGGAATTCCCCGTAGCTGATATTAAC
CCCAGGGATTTCCGATGCAGCACAGAACAAGAGGCACGGGCGGCACCAACGTGTCTGCCT
GTCCAAAAGTGCCCAGAACAATACGACATACCCCATGATGTCACTGAACTATACTTGGAG
ATGAATGATATTAGGGAAATCCCCGCATCAATAAAGAAATTTATCTATCTCACTACTTTG
GATCTGAGCAACAATGACATATCCAGCATAAATGATTGGATGTTTTCCAACTTAACACGA
TTATCTACTTTGCTATTGGCATACAACCGATTGCGGTGTATTCCACCCAAAGCATTCACC
GGTCTCCGATCACTCAGGATACTTTCCCTTCACAGTAATGAACTTTCAAGTTTACCGGAA
GGTGCATTTGATGACCTGACTTCCCTGTCCCATGTGGGATTTGGGGCCAATCCTTGGTAC
TGTGATTGCAATCTACGTTGGTTCAGCCAGTGGGTGAAATCAGATTTCTTCGAAGCAGGA
ATCGCACGATGCTCTGGTCCCCCTCGGATGGCTGGCCGCCTTCTTCTCTCATCGTCACTT
GAAACTTTTGTGTGTCAAGGACCACTGGACATCGCCATAGCTGTGAAATGTAACCCGTGT
CTGTCCTCTCCATGCCAGCACAACTCAACTTGTGGTGTGCACCCCACTGATTACTACCAA
TGCACATGCCAACCAGGTTTCAAAGGGAGGCATTGTGAGATGCCGATAGACCCTTGCATA
TTGGAGCCATGTCACAACGGTGCTAGATGTATAGCACGAGATGAGGCTGTATATAATTGT
GAGTGTGTGGTTGGATTCAGTGGCGATAGATGTGAGAACAATATCAATGACTGCACAGCT
ACCTCATGCCCAGTGTCGAATGCAACATGTATTGATGGGGTCAACACCTTTACGTGCCGC
TGCCCAGTGGGCTGGACTGGGACCAATTGTAATGAACAGATACCAGACCCATGCACATTA
GAACAACCATGCCAACATGGTGGATCTTGTGTCTTGTTACAAGAAATCGATGCTATATCT
TACAGATGTGACTGTAGCAGTGGGTACCGTGGGGTGAACTGTAGTGAACGTTTTGATCCC
TGTCTCAGCCACAAGTGCGAGAACAATGGCCTCTGTGAGATTAACCAACAATCGCCCATC
GGATACCAGTGCAATTGTGTAGGGGAATATCGAGGCCAATACTGCACATTTCCTATGGAT
ATAGTCGATGTGTTGCAAGATGACCCGTGTTCGGACAATGATTGTCAGCATGGATCTGAA
TGTTATATCGAGGACGGGAGAGATTATAAATGTCGCTGTTTGCCGGGCTATGCTGGGAAT
AAGTGTCAGCAGCTTGTAAGCCTCAGTTTCCAACGAAACGGGAGTTTCATAGAGACCCAG
CAGCAAGGACTCGTCGACACCAACTTCACATTCATCATCTCAACCACACAGCTAAACGGA
GTTCTAATGTACGATGGGGACAGCACTGGGTCATCTAGGGAACATCTTGCCATTGAGTTT
TTCACCGGTCATGTCCGTGTCAGCTACGATTTAGGGATTTCCCCAGGATCCACCATCTAC
AGT
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[1-17] 4.632 - T[21-42] 5.671 - T[147-168] 5.656 - T[171-192] 7.319 - T[195-216] 5.918 - T[219-240] 5.202 - T[243-264] 6.48 - T[374-395] 4.832 - T[399-420] 7.897 - T[423-444] 5.833 - T[447-468] 6.01 - T[471-492] 5.871 - T[573-594] 5.332 - T[596-617] 8.259 - T[620-641] 6.472 - T[644-665] 7.204 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[1-88] 1.3E-16 - T[116-331] 8.2E-66 - T[343-555] 3.4E-58 - T[558-728] 6.3E-49 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[19-42] 110.0 - T[149-168] 210.0 - T[169-192] 0.98 - T[193-216] 0.0057 - T[217-240] 2.2 - T[241-264] 0.0035 - T[397-420] 2.4E-5 - T[422-444] 140.0 - T[445-468] 0.43 - T[469-492] 3.3 - T[594-617] 14.0 - T[618-641] 0.0023 - T[642-665] 1.2E-5 |
| SMART |
Cys-rich_flank_reg_C (IPR000483) - T[30-79] 1.8E-5 - T[276-325] 1.9E-6 - T[498-547] 3.1E-8 - T[677-726] 1.0E-13 |
| Pfam |
Cys-rich_flank_reg_C (IPR000483) - T[54-78] 1.7 - T[301-314] 15.0 - T[522-547] 6.1E-4 - T[702-725] 0.02 |
| SMART |
LRRNT (IPR000372) - T[118-150] 7.6E-7 - T[345-377] 1.2E-5 |
| Pfam |
LRRNT (IPR000372) - T[119-145] 3.2E-6 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[149-206] 7.9E-13 - T[219-277] 3.9E-12 - T[426-482] 9.0E-11 - T[620-671] 2.1E-12 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[736-773] 0.18 - T[775-812] 0.016 - T[814-851] 5.9E-7 - T[856-895] 0.75 - T[946-983] 0.92 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[738-773] 16.582 - T[775-812] 19.917 - T[814-851] 17.39 - T[854-895] 18.554 - T[897-936] 15.145 - T[946-983] 18.317 |
| SMART |
EGF-like_dom (IPR000742) - T[739-773] 0.0031 - T[778-812] 9.7E-6 - T[817-851] 0.001 - T[857-895] 1.9E-6 - T[900-936] 0.1 - T[949-983] 6.0E-5 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[761-772] . - T[761-772] . - T[800-811] . - T[800-811] . - T[839-850] . - T[839-850] . - T[883-894] . - T[883-894] . - T[924-935] . - T[971-982] . - T[971-982] . |
| Pfam |
EGF-like_dom (IPR000742) - T[782-810] 1.0E-5 - T[827-848] 8.7E-6 - T[858-892] 5.9E-7 - T[950-980] 2.2E-5 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[814-839] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[830-841] . |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[971-1057] 4.35E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SLIT1_HUMAN | 47.359 % | 984 | 0 |
| SLIT3_HUMAN | 45.696 % | 969 | 0 |
| SLIT2_HUMAN | 46.442 % | 1016 | 0 |