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- Transcript 'Cisavi.CG.ENS81.R148...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R148.528035-537922.11471.t
Possible name(s)
LOXL2; LOXL3; LOXL4
Gene model
Location
R148 [528,037 / 537,877]
Amino acid sequence
Length: 700
>Cisavi.CG.ENS81.R148.528035-537922.11471.p
EGRVEVFHNGEWGTICDDDWSLAAAHVVCRMIGYDGAWEYLHSGKFGPGEGNILMDNVDC
IGDESDISRCQFNGWGNHDCSHHEDAGVKCNKRRLPGFHPDSQVNVIDGLDFLRLKPPRG
QRKRLPQLHGYVEFYHKNKWRKVCSTGWDKNTASVICGQLGFPMQQTNKSSQQIKFLMLM
KSFDFFNNSRSARRKLHYWLSNITCIGTESKVSHCNFQMVDTHTYNSCPGEPLITRCVPG
FKYARGNFKKGGKRKGRKHHATRQETIRLKVGSAEGEGRLEVMRSGRWGTVCHRGWNLWA
ANVACRELGFGTAKREIINSYFGAGHGPIWLTDLNCFGNETQLSDCRHGYISTHAEGYDE
LEESECTHEHDAGVACHVPQFNANQRIRLVGGRNPMEGRVEVKIRRKWGAVCSDNWTIKD
AMVVCRQLGLGFALHALKDVYFFPGTENVTNILMTGIQCRGDELALQFCPNDGNTLSQCG
SPGRTFTPFAGVICTELSPDLMQDIPLLQQSLHLDDRPLHNLYCASEEGCLAPSAEKMDW
PYGSRRLLRFSTRVWNRGRADFRPAKSQDQWIWHQCHGHYHSMSEFTHYDILDLNFTRVA
QGHKASFCLEDSECSPGVSPRFDCDQPGGGVQGIAVGCADNYQYNIDCQWIDITDVSPGN
YLIRIRVNPGSLVAESDFGNNEVICNLQYDGSRVWTWNCH
Nucleotide sequence
Length: 2,100
>Cisavi.CG.ENS81.R148.528035-537922.11471.t
GAAGGTCGCGTCGAAGTCTTTCACAACGGGGAATGGGGAACGATATGCGATGATGATTGG
AGCTTGGCGGCAGCACATGTCGTATGTAGAATGATCGGTTACGACGGTGCATGGGAGTAT
CTACACAGCGGCAAGTTTGGGCCCGGGGAAGGAAACATTTTGATGGATAATGTTGATTGT
ATCGGAGACGAGAGCGACATATCGCGGTGCCAATTTAACGGCTGGGGGAACCACGATTGC
TCCCACCACGAAGATGCTGGAGTGAAATGTAACAAACGAAGATTACCTGGATTTCACCCA
GACTCACAGGTGAATGTGATTGATGGCCTTGATTTTCTACGTTTAAAACCGCCTCGTGGA
CAGCGTAAACGCCTTCCACAACTTCATGGTTATGTTGAATTTTACCATAAAAATAAGTGG
AGGAAAGTGTGTTCAACAGGATGGGATAAAAACACTGCGTCAGTAATTTGTGGACAACTA
GGTTTTCCAATGCAACAAACAAACAAATCATCTCAACAAATAAAGTTTTTAATGCTAATG
AAATCCTTTGATTTTTTTAATAACAGTCGTTCTGCTCGAAGAAAACTACACTACTGGCTG
AGTAATATAACATGTATTGGTACTGAGAGTAAAGTATCACACTGCAATTTTCAAATGGTT
GACACTCATACTTACAACTCCTGCCCTGGGGAACCACTTATTACAAGGTGTGTACCTGGT
TTTAAATATGCACGTGGTAACTTCAAGAAAGGAGGCAAAAGAAAAGGAAGGAAACACCAT
GCTACTAGGCAAGAAACGATACGATTAAAAGTGGGCTCAGCTGAAGGAGAGGGAAGGCTA
GAGGTCATGAGGTCAGGTCGGTGGGGCACTGTGTGTCATCGGGGATGGAATCTATGGGCG
GCTAATGTGGCGTGCAGAGAGCTTGGGTTTGGAACTGCTAAGCGAGAGATTATTAACTCT
TACTTTGGTGCAGGGCATGGTCCAATTTGGCTGACTGATTTAAATTGCTTTGGTAATGAA
ACACAGTTGAGTGATTGTCGGCATGGATATATATCAACCCACGCTGAAGGGTATGATGAA
TTAGAGGAAAGCGAATGTACACATGAGCATGATGCAGGAGTGGCTTGTCATGTTCCTCAG
TTTAATGCAAACCAAAGAATACGTTTGGTTGGGGGTCGTAACCCAATGGAGGGTCGAGTA
GAAGTGAAAATCAGACGAAAGTGGGGAGCGGTGTGTAGCGATAATTGGACAATTAAAGAT
GCAATGGTCGTTTGCCGACAACTTGGTCTTGGTTTTGCTCTACATGCGCTAAAAGATGTT
TATTTCTTTCCTGGGACTGAAAATGTAACAAATATTTTAATGACTGGTATTCAATGTCGA
GGTGATGAACTAGCTCTGCAGTTTTGTCCCAATGACGGCAATACTTTATCCCAATGTGGG
TCACCTGGAAGAACTTTTACTCCATTTGCTGGGGTTATATGCACTGAATTATCACCAGAC
TTAATGCAGGATATACCATTGCTTCAACAATCATTGCATTTAGATGATAGACCTTTACAC
AACCTATATTGTGCTTCTGAAGAAGGGTGTCTTGCCCCATCAGCGGAAAAAATGGATTGG
CCGTATGGGTCACGACGTTTACTTCGTTTCTCCACCCGAGTATGGAACAGAGGGAGAGCT
GACTTCCGACCTGCTAAGTCCCAGGATCAGTGGATCTGGCATCAATGCCATGGGCACTAC
CACAGCATGTCAGAGTTTACTCACTACGATATATTGGATCTCAATTTCACTCGGGTCGCT
CAGGGGCATAAAGCAAGTTTCTGTTTGGAGGATAGCGAGTGTTCTCCTGGTGTGTCACCC
CGATTTGACTGTGACCAGCCCGGGGGCGGGGTGCAAGGAATTGCTGTTGGTTGTGCCGAT
AATTACCAATACAATATAGACTGCCAGTGGATCGACATTACTGATGTTTCACCTGGAAAT
TACTTGATAAGAATTCGTGTGAACCCTGGCTCATTAGTAGCAGAGTCTGATTTCGGGAAT
AACGAAGTAATTTGCAACCTCCAATATGATGGCAGTCGTGTTTGGACGTGGAATTGCCAT
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[1-96] 5.0E-37 - T[119-240] 2.4E-19 - T[259-381] 2.3E-33 - T[382-499] 1.2E-28 |
| SMART |
SRCR-like_dom (IPR017448) - T[1-91] 1.2E-39 - T[113-238] 8.2E-10 - T[267-377] 1.7E-34 - T[387-495] 3.2E-39 |
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[1-93] 2.75E-34 - T[128-238] 4.71E-17 - T[266-377] 7.06E-31 - T[385-500] 4.71E-30 |
| Pfam |
SRCR (IPR001190) - T[1-91] 7.6E-29 - T[128-228] 1.7E-16 - T[272-376] 1.1E-24 - T[390-494] 1.5E-23 |
| ProSiteProfiles |
SRCR (IPR001190) - T[1-91] 27.933 - T[113-238] 16.767 - T[267-377] 29.078 - T[387-495] 26.645 |
| PRINTS |
SRCR (IPR001190) - T[10-21] 9.1E-13 - T[25-35] 9.1E-13 - T[56-70] 9.1E-13 - T[79-91] 9.1E-13 |
| ProSitePatterns |
SRCR (IPR001190) - T[272-309] . - T[392-429] . |
| Pfam |
Lysyl_oxidase (IPR001695) - T[499-700] 2.5E-91 |
| PRINTS |
Lysyl_oxidase (IPR001695) - T[508-532] 1.7E-35 - T[553-574] 1.7E-35 - T[575-595] 1.7E-35 - T[625-647] 1.7E-35 - T[648-667] 1.7E-35 - T[668-685] 1.7E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOXL2_HUMAN | 44.258 % | 619 | 0 |
| LOXL3_HUMAN | 45.763 % | 629 | 0 |
| LOXL4_HUMAN | 44.958 % | 627 | 0 |