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- Transcript 'Cisavi.CG.ENS81.R148...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R148.528035-537922.11472.t
Possible name(s)
LOXL2; LOXL3; LOXL4
Gene model
Location
R148 [528,668 / 537,922]
Amino acid sequence
Length: 725
>Cisavi.CG.ENS81.R148.528035-537922.11472.p
SSTIQVRLREGKEASEGRVEVFHNGEWGTICDDDWSLAAAHVVCRMIGYDGAWEYLHSGK
FGPGEGNILMDNVDCIGDESDISRCQFNGWGNHDCSHHEDAGVKCNKRRLPGFHPDSQVN
VIDGLDFLRLKPPRGQRKRLPQLHGYVEFYHKNKWRKVCSTGWDKNTASVICGQLGFPSA
EEITNKMQYFIFCLNLIFFLSMVYFHDVHLHRSKARRKLHYWLSNITCIGTESKVSHCNF
QMVDTHTYNSCPGEPLITRCVPGFKYARGNFKKGGKRKGRKHHATVMQETIRLKVGSAEG
EGRLEVMRSGRWGTVCHRGWNLWAANVACRELGFGTAKREIINSYFGAGHGPIWLTDLNC
FGNETQLSDCRHGYISTHAEGYDELEESECTHEHDAGVACHVPQFNANQRIRLVGGRNPM
EGRVEVKIRRKWGAVCSDNWTIKDAMVVCRQLGLGFALHALKDVYFFPGTENVTNILMTG
IQCRGDELALQFCPNDGNTLSQCGSPGRTFTPFAGVICTESRKCRTCYLLFIISYHLMIL
EHYSNTFQYNNLNFPPVSPDLMQDIPLLQQSLHLDDRPLHNLYCASEEGCLAPSAEKMDW
PYGSRRLLRFSTRVWNRGRADFRPAKSQDQWIWHQCHGHYHSMSEFTHYDILDLNFTRVA
QGHKASFCLEDSECSPGVSPRFDCDQPGGGVQGIAVGCADNYQYNIDCQWIDITDVSPGN
YLIRV
Nucleotide sequence
Length: 2,175
>Cisavi.CG.ENS81.R148.528035-537922.11472.t
TCATCAACCATACAGGTCCGTTTACGCGAAGGGAAGGAGGCAAGCGAAGGTCGCGTCGAA
GTCTTTCACAACGGGGAATGGGGAACGATATGCGATGATGATTGGAGCTTGGCGGCAGCA
CATGTCGTATGTAGAATGATCGGTTACGACGGTGCATGGGAGTATCTACACAGCGGCAAG
TTTGGGCCCGGGGAAGGAAACATTTTGATGGATAATGTTGATTGTATCGGAGACGAGAGC
GACATATCGCGGTGCCAATTTAACGGCTGGGGGAACCACGATTGCTCCCACCACGAAGAT
GCTGGAGTGAAATGTAACAAACGAAGATTACCTGGATTTCACCCAGACTCACAGGTGAAT
GTGATTGATGGCCTTGATTTTCTACGTTTAAAACCGCCTCGTGGACAGCGTAAACGCCTT
CCACAACTTCATGGTTATGTTGAATTTTACCATAAAAATAAGTGGAGGAAAGTGTGTTCA
ACAGGATGGGATAAAAACACTGCGTCAGTAATTTGTGGACAACTAGGTTTTCCAAGTGCT
GAAGAAATAACAAACAAAATGCAATATTTTATATTTTGTCTTAATCTAATATTTTTTTTA
TCAATGGTGTATTTTCATGATGTTCATTTGCACAGGTCAAAAGCTCGAAGAAAACTACAC
TACTGGCTGAGTAATATAACATGTATTGGTACTGAGAGTAAAGTATCACACTGCAATTTT
CAAATGGTTGACACTCATACTTACAACTCCTGCCCTGGGGAACCACTTATTACAAGGTGT
GTACCTGGTTTTAAATATGCACGTGGTAACTTCAAGAAAGGAGGCAAAAGAAAAGGAAGG
AAACACCATGCTACTGTAATGCAAGAAACGATACGATTAAAAGTGGGCTCAGCTGAAGGA
GAGGGAAGGCTAGAGGTCATGAGGTCAGGTCGGTGGGGCACTGTGTGTCATCGGGGATGG
AATCTATGGGCGGCTAATGTGGCGTGCAGAGAGCTTGGGTTTGGAACTGCTAAGCGAGAG
ATTATTAACTCTTACTTTGGTGCAGGGCATGGTCCAATTTGGCTGACTGATTTAAATTGC
TTTGGTAATGAAACACAGTTGAGTGATTGTCGGCATGGATATATATCAACCCACGCTGAA
GGGTATGATGAATTAGAGGAAAGCGAATGTACACATGAGCATGATGCAGGAGTGGCTTGT
CATGTTCCTCAGTTTAATGCAAACCAAAGAATACGTTTGGTTGGGGGTCGTAACCCAATG
GAGGGTCGAGTAGAAGTGAAAATCAGACGAAAGTGGGGAGCGGTGTGTAGCGATAATTGG
ACAATTAAAGATGCAATGGTCGTTTGCCGACAACTTGGTCTTGGTTTTGCTCTACATGCG
CTAAAAGATGTTTATTTCTTTCCTGGGACTGAAAATGTAACAAATATTTTAATGACTGGT
ATTCAATGTCGAGGTGATGAACTAGCTCTGCAGTTTTGTCCCAATGACGGCAATACTTTA
TCCCAATGTGGGTCACCTGGAAGAACTTTTACTCCATTTGCTGGGGTTATATGCACTGAA
TCCAGAAAATGCAGAACTTGTTATTTACTGTTTATCATATCTTATCACTTAATGATTTTA
GAGCATTACAGCAATACATTTCAATATAATAATCTCAATTTTCCCCCAGTATCACCAGAC
TTAATGCAGGATATACCATTGCTTCAACAATCATTGCATTTAGATGATAGACCTTTACAC
AACCTATATTGTGCTTCTGAAGAAGGGTGTCTTGCCCCATCAGCGGAAAAAATGGATTGG
CCGTATGGGTCACGACGTTTACTTCGTTTCTCCACCCGAGTATGGAACAGAGGGAGAGCT
GACTTCCGACCTGCTAAGTCCCAGGATCAGTGGATCTGGCATCAATGCCATGGGCACTAC
CACAGCATGTCAGAGTTTACTCACTACGATATATTGGATCTCAATTTCACTCGGGTCGCT
CAGGGGCATAAAGCAAGTTTCTGTTTGGAGGATAGCGAGTGTTCTCCTGGTGTGTCACCC
CGATTTGACTGTGACCAGCCCGGGGGCGGGGTGCAAGGAATTGCTGTTGGTTGTGCCGAT
AATTACCAATACAATATAGACTGCCAGTGGATCGACATTACTGATGTTTCACCTGGAAAT
TACTTGATAAGAGTG
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[1-110] 1.3E-40 - T[134-263] 4.5E-20 - T[283-403] 2.5E-33 - T[404-527] 5.9E-29 |
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[3-108] 1.7E-38 - T[143-261] 4.97E-17 - T[290-401] 1.23E-30 - T[409-522] 9.55E-30 |
| SMART |
SRCR-like_dom (IPR017448) - T[6-106] 1.2E-49 - T[128-261] 2.5E-10 - T[291-401] 1.7E-34 - T[411-519] 3.2E-39 |
| ProSiteProfiles |
SRCR (IPR001190) - T[6-106] 30.064 - T[128-261] 16.465 - T[291-401] 29.078 - T[411-519] 26.645 |
| PRINTS |
SRCR (IPR001190) - T[6-22] 2.8E-19 - T[25-36] 2.8E-19 - T[40-50] 2.8E-19 - T[71-85] 2.8E-19 - T[94-106] 2.8E-19 |
| Pfam |
SRCR (IPR001190) - T[10-106] 2.2E-30 - T[143-251] 1.6E-16 - T[296-400] 1.2E-24 - T[414-518] 1.6E-23 |
| ProSitePatterns |
SRCR (IPR001190) - T[11-48] . - T[296-333] . - T[416-453] . |
| Pfam |
Lysyl_oxidase (IPR001695) - T[559-725] 2.8E-75 |
| PRINTS |
Lysyl_oxidase (IPR001695) - T[568-592] 1.4E-29 - T[613-634] 1.4E-29 - T[635-655] 1.4E-29 - T[685-707] 1.4E-29 - T[708-725] 1.4E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOXL2_HUMAN | 41.272 % | 558 | 0 |
| LOXL3_HUMAN | 42.877 % | 570 | 0 |
| LOXL4_HUMAN | 41.678 % | 567 | 0 |