- Transcript 'Cisavi.CG.ENS81.R151...' >
- Transcript 'KH2012:KH.C8.552.v1....' >
- Transcript 'Cisavi.CG.ENS81.R151...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R151.104815-106074.04214.t
Possible name(s)
ZIC2; ZIC3; ZIC4
Gene model
Location
R151 [104,814 / 106,074]
Amino acid sequence
Length: 361
>Cisavi.CG.ENS81.R151.104815-106074.04214.p
MYSALSDRPYAAYDPRASLTAQTSFLQAHQHSIDSKPMQLNSVPSAAYLGYGMIPHFPQS
LHLATGLHNPVENRQPVHTSSTLSHPVPCKWMNPKYGGRSCDVIFHDMHDLVNHVTRDHV
GGMDQTDHTCYWEDCSRKRKCFKAKYKLVNHIRVHTGEKPFLCPYPDCGKMFGRSENLKI
HQRTHTGERPFPCKFPGCERRFANSSDRKKHSYMHNTEKLYTCKYEGCDRSYTHPSSLRK
HIRMHESNGDVITSSTSPTTSCGSSDFASSPEHVEQFQTYPAISEPMTSQPMSINPHVTS
SPDTSPPKLMPCEMNYPGFSYKREYQHGNWQTFPSSDLPDLYNQPDYLPQTFLPPTQFSV
V
Nucleotide sequence
Length: 1,178
>Cisavi.CG.ENS81.R151.104815-106074.04214.t
ATCAATATCATGTACAGTGCATTGAGCGATAGACCTTATGCTGCTTACGACCCAAGAGCC
AGCCTTACAGCTCAAACCTCATTCCTTCAAGCGCATCAACATTCCATCGATTCCAAACCA
ATGCAGTTAAACAGCGTTCCAAGTGCTGCGTATCTGGGGTATGGAATGATTCCACATTTC
CCTCAAAGCTTACATCTCGCTACTGGACTGCACAATCCGGTGGAGAATCGTCAGCCGGTG
CACACCTCTTCGACTCTCTCGCATCCAGTCCCTTGCAAGTGGATGAACCCGAAATATGGC
GGACGATCTTGTGATGTCATATTCCACGACATGCATGACTTGGTAAACCACGTGACACGA
GATCACGTGGGTGGAATGGATCAGACCGATCACACTTGTTACTGGGAAGATTGTTCGAGA
AAACGAAAATGTTTCAAAGCCAAGTACAAGTTGGTCAACCACATTCGAGTTCACACTGGA
GAGAAACCTTTTCTCTGTCCTTATCCAGATTGTGGTAAAATGTTCGGTCGAAGCGAAAAT
TTAAAGATTCATCAAAGAACTCATACAGGTGAACGACCTTTCCCTTGCAAATTCCCCGGT
TGCGAAAGAAGATTCGCGAATAGTTCCGACCGTAAGAAGCACAGCTACATGCACAACACA
GAGAAACTGTACACGTGCAAGTATGAAGGATGCGATCGAAGCTACACTCATCCGAGCTCA
TTACGTAAGCACATACGTATGCATGAATCCAATGGTGACGTCATCACTTCGTCAACATCA
CCAACAACGTCATGTGGATCATCTGACTTCGCTTCCTCTCCTGAACACGTCGAACAATTC
CAAACGTACCCTGCGATATCTGAGCCGATGACATCACAGCCCATGTCGATCAATCCTCAT
GTGACGTCATCACCTGATACGTCACCGCCCAAGCTAATGCCATGCGAGATGAACTATCCT
GGGTTCTCCTACAAGAGGGAATACCAGCACGGGAACTGGCAGACCTTTCCATCTTCCGAT
CTACCCGACTTGTACAATCAGCCAGATTATCTTCCTCAAACCTTCCTACCTCCAACGCAA
TTCTCAGTTGTTTAGCTGCGATATTCTTAAGTTGTAAATATTTATCTATTTATCTGCATT
TTTCAATATGCTTTGAAATAAACCATTATTACTCTAAA
| SMART |
Znf_C2H2_type (IPR013087) - T[87-119] 290.0 - T[128-155] 7.5 - T[161-185] 0.0012 - T[191-215] 0.044 - T[221-245] 9.8E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[133-160] 11.24 - T[161-190] 16.623 - T[191-220] 10.408 - T[221-250] 11.281 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[142-198] 3.16E-19 - T[202-246] 5.25E-10 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[163-185] . - T[193-215] . - T[223-245] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 61.081 % | 234 | 1.15E-74 |
| ZIC2_HUMAN | 61.798 % | 236 | 2.65E-73 |
| ZIC3_HUMAN | 60.622 % | 244 | 6.03E-77 |