- Clone 'cien147770' >
- Transcript 'KH2012:KH.C9.770.v1....' >
- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Cisavi.CG.ENS81.R151...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R151.109573-115765.04225.t
Possible name(s)
ZIC1; ZIC3; ZIC4
Gene model
Location
R151 [109,572 / 115,765]
Amino acid sequence
Length: 355
>Cisavi.CG.ENS81.R151.109573-115765.04225.p
MYSALSDRPYAAYDPRASLTAQTSFLQAHQHSIDSKPMQLNSVPSAAYYAGYGMIPHFPP
SLHLATGLHNPVENRQPVHTSSTLSHPVACKWMNPKHGGRSCDVIFHDMHDLVNHLTRDH
VGGMDQTDHTCYWKDCSRKRKCFKAKYKLVNHIRVHTGEKPFLCPYPDCGKMFGRSENLK
IHQRTHTGERPFPCKFPGCERRFANSSDRKKHSYMHNTEKLYTCKYEGCDRSYTHPSSLR
KHIRMHETNGDVITSSQSPTKEDVTDCNPLRGELIPRMTSSPINTSPQCDVTDNSSLMFL
FHERNLPQVPPTEPQYEPTNQPYYNDYYYQEAANAAHYKPTYTNVPFQLPQPFVA
Nucleotide sequence
Length: 1,118
>Cisavi.CG.ENS81.R151.109573-115765.04225.t
CAGCAATCAATATCATGTACAGTGCATTGAGCGATAGACCTTATGCTGCTTACGACCCAA
GAGCCAGTCTCACAGCTCAAACCTCATTCCTTCAAGCGCATCAACATTCCATCGATTCCA
AACCAATGCAGTTAAACAGCGTTCCAAGTGCTGCGTATTACGCTGGGTATGGTATGATTC
CACATTTCCCTCCAAGCTTACATCTCGCTACTGGACTGCACAATCCGGTGGAGAATCGTC
AGCCGGTGCACACCTCTTCGACTCTCTCGCATCCAGTCGCTTGCAAGTGGATGAACCCGA
AACATGGCGGACGATCTTGTGATGTCATATTTCACGATATGCATGACTTGGTAAACCACC
TTACACGAGATCACGTGGGTGGAATGGATCAGACCGATCACACTTGTTACTGGAAAGATT
GTTCGAGGAAACGCAAATGTTTCAAAGCCAAGTACAAGTTGGTCAACCACATTCGAGTTC
ACACTGGAGAGAAACCTTTTCTCTGTCCTTATCCCGATTGTGGTAAAATGTTCGGTCGAA
GCGAAAATTTGAAGATTCATCAAAGAACTCATACAGGTGAACGACCTTTCCCTTGCAAAT
TCCCCGGTTGCGAAAGAAGATTCGCGAATAGTTCCGACCGTAAGAAGCACAGCTACATGC
ACAACACAGAGAAACTCTACACGTGCAAGTATGAAGGCTGCGATCGAAGCTACACTCATC
CGAGCTCATTACGTAAGCACATACGTATGCACGAAACCAATGGTGACGTCATCACATCGT
CACAATCACCAACAAAAGAAGACGTGACCGACTGCAATCCCTTGCGAGGGGAATTAATCC
CTCGAATGACGTCATCGCCTATTAATACGTCACCTCAATGTGATGTCACAGACAATTCTA
GCCTCATGTTCTTATTTCACGAAAGGAATCTTCCACAAGTTCCACCAACAGAACCTCAGT
ACGAACCGACTAACCAACCTTACTACAACGATTATTACTACCAAGAAGCCGCCAACGCAG
CCCACTATAAACCAACTTATACCAACGTTCCTTTCCAATTACCGCAACCTTTTGTCGCCT
GATCCATTCATCTTATTAATAAATCGTTGATATGTATA
| SMART |
Znf_C2H2_type (IPR013087) - T[88-120] 310.0 - T[129-156] 8.2 - T[162-186] 0.0012 - T[192-216] 0.044 - T[222-246] 9.8E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[134-161] 11.323 - T[162-191] 16.623 - T[192-221] 10.408 - T[222-251] 11.011 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[143-199] 3.09E-19 - T[203-247] 3.11E-10 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[164-186] . - T[194-216] . - T[224-246] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 60.92 % | 229 | 3.48E-73 |
| ZIC3_HUMAN | 57.732 % | 240 | 1.8E-75 |
| ZIC1_HUMAN | 60.227 % | 231 | 1.86E-72 |