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TRANSCRIPT CARD

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  1. Clone 'man30g12' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  4. Clone 'citb030o15' > 
  5. Transcript 'Cisavi.CG.ENS81.R151...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R151.129671-130910.04247.t

Possible name(s)

ZIC1; ZIC3; ZIC4

Gene model

Cisavi.CG.ENS81.R151.129671-130910

Location

R151 [129,670 / 130,910]

Sequences

Amino acid sequence

Length: 355

>Cisavi.CG.ENS81.R151.129671-130910.04247.p
MYSALSDRPYAAYDPRASLTAQTSFLQAHQHSIDSKPMQLNSVPSAAYYAGYGMIPHFPQ
SLHLATVLHNPVENRQPVHTSSTLSHPVACKWMNPKHGGRSCDVIFHDMHDLVNHVTRDH
VGGMDQTDHTCYWEDCSRKRKCFKAKYKLVNHIRVHTGEKPFLCPYPDCGKMFGRSENLK
IHQRTHTGERPFPCKFPGCERRFANSSDRKKHSYMHNTEKLYTCKYEGCDRSYTHPSSLR
KHIRMHESNGDFITSSQSPTTEDVTDCNPLRGELIPRMTSSPINTSPQCDVTDNSSPMFL
FHERNLPQVPPTEPQYEPTNQLYYNDYYYQEAANAAHYKPTYTNVPFQLPQPFVA

Nucleotide sequence

Length: 1,139

>Cisavi.CG.ENS81.R151.129671-130910.04247.t
ATCAATATCATGTACAGTGCATTGAGCGATAGACCGTATGCTGCTTACGACCCAAGAGCC
AGTCTCACAGCTCAAACCTCATTCCTTCAAGCGCATCAACATTCCATCGATTCTAAACCA
ATGCAGTTAAACAGCGTTCCAAGTGCTGCGTATTACGCTGGGTATGGAATGATTCCTCAT
TTTCCTCAAAGCTTACATCTCGCTACTGTACTGCACAATCCGGTGGAGAATCGTCAGCCG
GTGCACACCTCTTCGACTCTCTCGCATCCAGTCGCTTGCAAGTGGATGAACCCGAAACAT
GGCGGACGATCTTGTGATGTCATATTCCACGATATGCATGACTTGGTAAACCACGTGACA
CGAGATCACGTGGGTGGAATGGATCAGACCGATCACACTTGTTACTGGGAAGATTGTTCG
AGAAAACGCAAATGTTTCAAAGCCAAGTACAAGTTGGTCAATCACATTCGAGTTCACACT
GGAGAGAAACCTTTTCTCTGTCCTTATCCCGATTGTGGTAAAATGTTCGGTCGAAGCGAA
AATTTAAAGATTCACCAAAGAACTCATACAGGTGAACGACCTTTCCCTTGCAAATTCCCT
GGTTGCGAAAGAAGATTCGCGAATAGTTCCGACCGTAAGAAGCACAGCTACATGCACAAC
ACAGAGAAACTCTACACGTGCAAGTATGAAGGCTGCGATCGAAGCTACACTCATCCGAGC
TCATTACGTAAGCACATACGTATGCACGAATCTAATGGTGACTTCATCACTTCGTCACAA
TCACCAACAACAGAAGACGTGACCGACTGCAATCCCTTGCGAGGGGAATTAATTCCTCGA
ATGACGTCATCGCCTATTAATACGTCACCTCAATGTGATGTCACAGACAATTCCAGCCCC
ATGTTCTTGTTCCACGAAAGGAATCTTCCACAAGTTCCACCAACAGAACCTCAGTACGAA
CCCACCAACCAACTTTACTACAACGATTATTACTACCAAGAAGCCGCCAACGCAGCCCAC
TATAAACCAACTTATACCAACGTTCCTTTCCAATTACCGCAACCATTTGTCGCCTGATCC
ATTCATCTTATTAATACATCGTTGAGAAATAAATTGGTTATTCATCAGGAGTAGAACAA

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[129-156] 7.5 - T[162-186] 0.0012 - T[192-216] 0.044 - T[222-246] 9.8E-5
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[134-161] 11.24 - T[162-191] 16.623 - T[192-221] 10.408 - T[222-251] 11.281
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[143-199] 3.09E-19 - T[203-248] 3.05E-10
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[164-186] . - T[194-216] . - T[224-246] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZIC4_HUMAN 62.069 % 233 1.89E-74
ZIC3_HUMAN 59.278 % 243 8.67E-77
ZIC1_HUMAN 61.364 % 234 1.75E-73