- Transcript 'Cisavi.CG.ENS81.R15....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R15.1727452-1732769.14872.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
R15 [1,727,451 / 1,732,313]
Amino acid sequence
Length: 272
>Cisavi.CG.ENS81.R15.1727452-1732769.14872.p
MSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDAGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGK
Nucleotide sequence
Length: 862
>Cisavi.CG.ENS81.R15.1727452-1732769.14872.t
CTCTTATTCAACAATAGAACCTTAGTAGCTAAGTTTGAAAGTAAAAATGTCGGACTCAGA
AGAAGATCAAACCGCTTTGGTGTGCGACAACGGTTCAGGTTTGGTTAAGTCTGGTTTTGC
TGGAGATGACGCACCTCGCGCCGTCTTCCCATCCATTGTTGGACGACCACGTCATCAGGG
AGTCATGGTCGGTATGGGCCAGAAAGACAGCTACGTTGGCGACGAAGCTCAAAGCAAGAG
AGGCATCCTCACTCTCAAATACCCCATCGAACACGGTATCATCACTAACTGGGACGATAT
GGAAAAGATCTGGCACCACACCTTTTACAACGAGCTCCGAGTTGCACCAGAGGAACACCC
AACTCTGCTAACTGAAGCCCCACTTAACCCGAAAGCGAACCGAGAAAAGATGACGCAGAT
CATGTTCGAAACGTTCAATGTGCCAGCGATGTACGTAGCAATCCAGGCCGTGCTTTCTCT
CTACGCTTCTGGCCGTACCACAGGTATCGTTATGGATGCCGGTGACGGTGTTTCCCACAA
TGTTCCAATCTACGAGGGTTATGCGCTCCCTCACGCCATCGCCCGGTTGGATTTAGCTGG
ACGAGATCTTACTGATTACTTGATGAAGATTCTCACCGAGAGAGGATATTCTTTCGTCAC
AACTGCTGAACGCGAAATCGTTCGAGACATCAAAGAAAAACTTTGCTACGTTGCTCTTGA
TTTTGAGCAAGAAATGGCGACCGCTGCATCTTCTACGTCACTGGAAAAAAGTTATGAGCT
TCCCGATGGTCAAGTCATCACGATCGGAAACGAGAGATTTAGATGTCCAGAAACGCTCTT
CCAGCCTTCATTCATTGGTAAG
| PANTHER |
Actin (IPR004000) - T[4-271] 4.6E-187 |
| Pfam |
Actin (IPR004000) - T[7-271] 1.9E-95 |
| SMART |
Actin (IPR004000) - T[8-272] 4.1E-111 |
| PRINTS |
Actin (IPR004000) - T[29-38] 4.8E-58 - T[52-63] 4.8E-58 - T[64-86] 4.8E-58 - T[118-131] 4.8E-58 - T[143-162] 4.8E-58 - T[239-255] 4.8E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 96.255 % | 545 | 0 |
| ACTS_HUMAN | 96.255 % | 544 | 0 |
| ACTC_HUMAN | 95.941 % | 545 | 0 |