- Transcript 'Cisavi.CG.ENS81.R15....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R15.1727452-1732769.14874.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
R15 [1,727,497 / 1,728,970]
Amino acid sequence
Length: 376
>Cisavi.CG.ENS81.R15.1727452-1732769.14874.p
MSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDADGVSHNVPIYEGYALPHAIARL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLEK
SYELPDGQVTIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITK
QEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,208
>Cisavi.CG.ENS81.R15.1727452-1732769.14874.t
ATGTCGGACTCAGAAGAAGATCAAACCGCTTTGGTGTGCGACAACGGTTCAGGTTTGGTT
AAGTCTGGTTTTGCTGGAGATGACGCACCTCGCGCCGTCTTCCCATCCATTGTTGGACGA
CCACGTCATCAGGGAGTCATGGTCGGTATGGGCCAGAAAGACAGCTACGTTGGCGACGAA
GCTCAAAGCAAGAGAGGCATCCTCACTCTCAAATACCCCATCGAACACGGTATCATCACT
AACTGGGACGATATGGAAAAGATCTGGCACCACACCTTTTACAACGAGCTCCGAGTTGCA
CCAGAGGAACACCCAACTCTGCTAACTGAAGCCCCACTTAACCCGAAAGCGAACCGAGAA
AAGATGACGCAGATCATGTTCGAAACGTTCAATGTGCCAGCGATGTACGTAGCAATCCAG
GCCGTGCTTTCTCTCTACGCTTCTGGCCGTACCACAGGTATCGTTATGGATGCCGACGGT
GTTTCCCACAATGTTCCAATCTACGAGGGTTATGCGCTCCCCCACGCCATCGCCCGGTTG
GATTTAGCTGGACGAGATCTCACTGATTACTTGATGAAGATTCTCACCGAGAGAGGATAT
TCTTTCGTCACAACCGCGGAACGCGAAATCGTTCGAGACATTAAAGAAAAACTTTGCTAC
GTTGCTCTTGATTTTGAGCAAGAAATGGCGACCGCTGCGTCTTCTACGTCACTGGAAAAA
AGTTATGAGCTTCCCGATGGTCAAGTCACGATCGGAAACGAGAGATTCAGATGCCCAGAA
ACGCTCTTCCAGCCTTCTTTTATCGGAATGGAATCCGCTGGAATCCACGAAACCACCTAC
AATTCCATCATGAAGTGCGACATCGACATCCGCAAGGATCTCTACGCCAACAACGTTCTC
TCCGGAGGTACCACCATGTACCCTGGTATCGCCGACAGGATGCAGAAGGAGATCACTGCT
CTTGCTCCCAGCACCATGAAGATCAAGATCATTGCTCCTCCTGAGAGGAAATACTCCGTA
TGGATCGGAGGCTCCATCCTCGCATCTTTATCCACCTTCCAGCAGATGTGGATCACCAAG
CAAGAATACGACGAAGCTGGTCCATCCATCGTCCACAGAAAATGCTTTTAAATCCAGTGA
TTTATGAATGACTTTTTATAGAGTATTTAATTTCTGATTTTACCTAGGGCATTTCGCACT
GTGTTTAA
| PANTHER |
Actin (IPR004000) - T[5-375] 3.9E-261 |
| Pfam |
Actin (IPR004000) - T[7-376] 2.4E-141 |
| SMART |
Actin (IPR004000) - T[8-376] 8.5E-224 |
| PRINTS |
Actin (IPR004000) - T[29-38] 1.1E-47 - T[52-63] 1.1E-47 - T[64-86] 1.1E-47 - T[118-131] 1.1E-47 - T[143-162] 1.1E-47 - T[238-254] 1.1E-47 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[357-365] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 96.524 % | 753 | 0 |
| ACTS_HUMAN | 96.524 % | 753 | 0 |
| ACTC_HUMAN | 96.296 % | 753 | 0 |