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  1. Transcript 'Cisavi.CG.ENS81.R15....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R15.342232-346984.09182.t

Possible name(s)

TMED3; TMED7; TMED7-TICAM2

Gene model

Cisavi.CG.ENS81.R15.342232-346984

Location

R15 [342,231 / 346,984]

Sequences

Amino acid sequence

Length: 206

>Cisavi.CG.ENS81.R15.342232-346984.09182.p
MHFTLLLLLLGVYHANAVELTYELEDNSKQCFFQDITKDTRTTVEYQVISGGRYDVDCSI
EDPDGLKLYSEKRKQYDSYAWDAQKTGAYQICFSNEFSTITHKVIYFSMIVGDEKPLLDS
MDHATALTQMESYCATVHEKVKSVIASQTHFRLREALGRVFAEAINSRVQIWSAVQITIM
IIVMVGEVFVLKGLFNTRKPLTRTDT

Nucleotide sequence

Length: 1,273

>Cisavi.CG.ENS81.R15.342232-346984.09182.t
GTTTAATTAAGTATGCCGAATTGTAGATAGAGAAAATATATTCGTGGAACAATTTCTGCT
TCTAGTAATTTCATCAGAATTAATTTAGCGATGCATTTTACGTTACTTCTTCTCCTACTG
GGGGTATACCACGCCAATGCAGTGGAACTCACATATGAACTGGAAGACAATTCGAAGCAA
TGCTTTTTCCAAGATATAACAAAAGACACAAGAACAACTGTTGAATACCAGGTTATCAGT
GGTGGAAGGTATGATGTGGACTGTTCGATTGAAGATCCAGATGGTTTGAAGCTGTATTCA
GAAAAGCGGAAACAATACGACTCATATGCATGGGATGCACAGAAAACTGGTGCATACCAG
ATTTGCTTTAGCAACGAATTTTCCACCATCACCCACAAGGTGATCTACTTCTCCATGATC
GTTGGTGATGAGAAACCGCTGCTTGATAGCATGGACCACGCCACTGCACTTACACAGATG
GAGAGCTACTGCGCAACAGTTCACGAAAAAGTAAAGAGCGTTATCGCATCACAAACGCAT
TTCCGACTAAGAGAAGCTCTTGGCAGAGTATTTGCGGAAGCAATTAATAGTCGTGTTCAG
ATATGGTCAGCAGTTCAAATCACCATCATGATAATAGTGATGGTGGGAGAAGTTTTTGTT
TTAAAAGGTCTTTTCAACACTAGAAAGCCGCTGACTCGTACTGACACCTAACGCACTTTC
ACTCGATAAACCCTAGAACTAGGTTTCAATTTAGCGGGGATTCTGAGAGACAAATTACAC
TTTCTGCCAAAAGGTTTAATTTTTTTAAAAATTTCAAAATATTAATATTCTACAGTGTAC
TGTATGGTAAAATAACATTCTATTTTACTACGTTTTTGAACTGTATTTTATTGAAGCAAG
TCTGTATGTTCTCCTTGTGTTTCGTACTGGGACGTTTTGGAATTTCGTAGCATTACCCAT
CAGTGATTATCCTTTTTATCTGGATACTTTTTGCATAGATTGGCTGCAACACAACTCAAA
TCATTATGCTCCACTTATTTTTTATTTTGTTTGGATCAAATTTTGTTGCGTCGTTATATT
AAGATTTAGAATTTTCAATATTTTTTGTAAATGACTATTTATTCAGAAATTTTACGAGCG
AAATTTGACAAAAGATTTTTGTGTTGATATTAACTATTGCAATTTATTGTGAAGCTTTTT
CAATGTCTTTGGCCAAGGTCGATTTGGTGAACGGTTGCAATTTTCTGTTGAAATAAACGT
AGGTACAAAAACA

InterProScan

PANTHER
TMP21-related (IPR015720) - T[5-200] 4.5E-77
PANTHER
TMED7 (IPR015718) - T[5-200] 4.5E-77
SMART
GOLD_dom (IPR009038) - T[19-196] 6.8E-59
Pfam
GOLD_dom (IPR009038) - T[20-195] 4.9E-43
SUPERFAMILY
GOLD_dom_sf (IPR036598) - T[28-122] 4.05E-22
ProSiteProfiles
GOLD_dom (IPR009038) - T[29-111] 19.243

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMED2_HUMAN 27.841 % 102 2.28E-27
TMED7_HUMAN 54.255 % 229 1.24E-76
TMED3_HUMAN 51.064 % 215 3.65E-71