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  1. Clone 'cieg072i09' > 
  2. Transcript 'KH2012:KH.C10.148.v1...' > 
  3. Transcript 'Mooccu.CG.ELv1_2.S46...' > 
  4. Transcript 'KH2012:KH.S1035.5.v1...' > 
  5. Transcript 'Cisavi.CG.ENS81.R155...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R155.454259-459031.08637.t

Possible name(s)

SDE2; SF3A3

Gene model

Cisavi.CG.ENS81.R155.454259-459031

Location

R155 [454,258 / 459,031]

Sequences

Amino acid sequence

Length: 499

>Cisavi.CG.ENS81.R155.454259-459031.08637.p
METILEQQRSLHEEKERLLDCMRKETLSEKSTLRENINSDHKVKMLLNRSMEVSDKLTEL
YADRDGLRKEEIQALAGPGEFQEFYKRLKGIREFHKKHPNEIFVPLSAEFVRLDEARENP
TDEVSNLVEFADEEAYGRFLDLHECFMKYTNLKGIERVSYVKYLEIFEKLFEINRDKKNK
QYKEYIQSLLDYLLSFHRRVKPLVDLTEDFKKLEVAFEEQWEKVEFPGWGKEAGSAMTYA
GAHLDLSPFSSPEELASLGLDRLKSALMALNLKCGGTLDQRADRLFITKGKNINELDPSL
FSKAKTTKKEDKKRGKDIAFIEARIYHMMELLGEQRQATRDNVQRRQARTETERQDDGEE
VVSESESEDEDDEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINFNCEICGNQTYRGPKAF
QRHFSEWRHAHGMRCLGIPNTAHFANVTQIEDAMALWTKIKQTKHSERWNPDADEEWEDS
AGNVVSKKTFEDLQRQGLL

Nucleotide sequence

Length: 1,737

>Cisavi.CG.ENS81.R155.454259-459031.08637.t
TTAAACTGCTGTACCATAGTAGGCCTATCTATGTTTTAAAAAACTTATATCTGTGTATGA
TATCTCGGTTCACATTTCAAAATGGAAACGATTTTGGAGCAGCAACGTAGTTTGCATGAG
GAGAAAGAACGGTTGTTGGATTGTATGCGGAAAGAAACACTCAGCGAAAAATCCACGTTG
AGAGAGAACATTAATTCCGATCACAAAGTCAAAATGTTGCTTAATAGAAGTATGGAGGTA
TCTGACAAACTAACCGAACTATATGCCGATAGAGATGGGCTTAGAAAAGAAGAAATACAG
GCACTAGCTGGACCAGGAGAGTTCCAGGAGTTTTACAAGCGATTAAAAGGAATCCGAGAA
TTCCACAAAAAGCACCCAAACGAAATATTTGTTCCATTGTCGGCAGAATTTGTTCGCTTG
GATGAAGCACGAGAAAACCCCACAGATGAAGTCAGCAATTTAGTTGAATTTGCTGATGAG
GAGGCTTATGGGAGATTCCTAGACCTGCACGAGTGCTTCATGAAATACACCAACTTGAAA
GGAATAGAGCGTGTTAGCTACGTCAAATATCTCGAAATATTTGAGAAACTTTTTGAGATC
AACAGAGACAAGAAAAACAAACAATATAAAGAATACATCCAGAGTTTGCTTGACTATCTC
CTGTCCTTCCATCGTCGTGTAAAACCACTTGTTGATCTTACAGAGGACTTCAAGAAGTTG
GAGGTGGCTTTCGAGGAGCAGTGGGAGAAGGTGGAGTTCCCAGGATGGGGTAAAGAAGCA
GGGAGTGCGATGACGTATGCCGGGGCTCATCTTGATCTGAGCCCCTTTTCCTCCCCCGAG
GAGCTGGCCTCACTAGGCTTGGATCGATTGAAATCTGCGCTGATGGCTCTCAACTTGAAA
TGTGGAGGAACATTGGACCAGAGAGCTGATCGACTCTTCATCACAAAAGGCAAAAACATC
AATGAACTCGACCCATCTTTGTTTTCCAAGGCAAAAACCACAAAAAAAGAAGACAAAAAA
CGAGGCAAAGACATCGCGTTCATAGAGGCACGAATCTACCACATGATGGAGCTGTTGGGT
GAGCAGCGGCAAGCGACGAGAGACAATGTCCAACGACGACAAGCGAGAACTGAGACTGAA
CGCCAAGATGACGGGGAAGAGGTAGTCTCAGAAAGCGAAAGTGAAGATGAAGATGATGAG
ATCATATACAACCCGAAGAACTTACCACTTGGGTGGGACGGCAAACCCATCCCATACTGG
CTGTACAAACTTCACGGCCTCAATATTAACTTCAACTGCGAGATATGCGGGAATCAGACT
TACAGAGGACCAAAGGCTTTTCAACGACATTTTTCGGAGTGGAGACACGCCCATGGTATG
AGGTGTCTTGGCATCCCGAACACCGCACATTTTGCAAACGTCACGCAGATTGAAGACGCC
ATGGCTTTGTGGACGAAGATCAAACAGACGAAACACTCCGAGCGATGGAATCCGGATGCT
GACGAAGAATGGGAAGACTCTGCGGGAAACGTCGTTTCAAAGAAGACTTTCGAAGATTTG
CAGAGACAAGGGCTCCTCTAACATTATCACGAAGTTGTTGTAGAATTATTTCTTAGAATT
TGATCAGCTCAAGTTTTAACATTTATATTAAATTCAAATGTGTGGAAACTTTCAAAATGA
TGATCTGAGACTATTATTCTTTAACTTACTTTCCAATTTAAGAATTTTTCTCTTGGA

InterProScan

PANTHER
SF3A3 (IPR031776) - T[1-499] 1.9E-182
Pfam
SF3a60_bindingd (IPR021966) - T[75-100] 1.4E-11
Pfam
SF3A3_dom (IPR031774) - T[129-206] 7.5E-24
Pfam
DUF3449 (IPR024598) - T[322-498] 2.6E-76
ProSiteProfiles
Matrin/U1-C_Znf_C2H2 (IPR000690) - T[404-435] 8.962

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF3A3_HUMAN 67.864 % 685 0





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