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TRANSCRIPT CARD

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  1. Region 'REG00001111' > 
  2. Clone 'cicl007g16' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S4...' > 
  5. Transcript 'Cisavi.CG.ENS81.R156...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R156.157534-169654.14314.t

Possible name(s)

TBX3; TBX4; TBX6

Gene model

Cisavi.CG.ENS81.R156.157534-169654

Location

R156 [157,533 / 169,654]

Sequences

Amino acid sequence

Length: 202

>Cisavi.CG.ENS81.R156.157534-169654.14314.p
MFPGYRVKMTGMDPNAQYCVLLDISSVDENRYKFQHGKWLIAGRGEPHIPQRFYLHPNSP
CTGQQWMKDIVSFHKVKLTNSCGNCGDGKFLVHSMHRYQPRVHIVQTDDVNTLHLQPMST
FAFPQTSFTTVTAYQNGEIAKLKISNNPYARGFREDGAKTMKAKSTLASFTRPVSTTHKR
RCSPNTTSPNSTKRVKLDYAPA

Nucleotide sequence

Length: 771

>Cisavi.CG.ENS81.R156.157534-169654.14314.t
ACGAAGATTCTGGAACATTAAAAGATGATAATGAAAATTGCAAATTCAAACCATCAAGCG
ATAAGCTCACGATCCGGACCGCAAGTTCATCTTCACGATGTTCAGTTATGGGATAGTTTC
TCAGCTGCTCAGACTGAAATGATTGTTACTAAAACCGGAAGCGAATGTTTCCTGGTTACC
GAGTTAAAATGACTGGGATGGACCCGAACGCTCAGTATTGCGTATTGTTGGACATTTCGA
GTGTGGATGAAAACAGATACAAGTTTCAACACGGGAAGTGGCTGATAGCTGGTCGTGGAG
AACCACATATCCCACAAAGATTTTATTTGCACCCGAACTCACCTTGTACCGGACAACAAT
GGATGAAAGATATCGTTTCTTTCCACAAAGTTAAATTAACCAACTCATGTGGGAATTGTG
GAGACGGAAAGTTCCTCGTACATTCCATGCATCGATATCAACCTCGCGTCCACATTGTTC
AAACTGATGACGTCAATACGTTACATCTTCAACCGATGTCAACTTTCGCTTTCCCACAAA
CTTCCTTTACAACGGTCACAGCATACCAGAACGGGGAGATCGCTAAGTTAAAGATCTCTA
ACAACCCTTACGCCCGAGGCTTCCGAGAAGACGGAGCGAAGACTATGAAAGCGAAATCGA
CACTTGCGTCATTTACTCGACCTGTATCAACCACCCACAAGCGAAGATGCTCTCCAAACA
CCACTTCTCCGAATTCCACAAAACGAGTGAAACTTGATTACGCACCAGCAG

InterProScan

PANTHER
TF_T-box (IPR001699) - T[1-172] 1.7E-100
SMART
TF_T-box (IPR001699) - T[1-160] 1.6E-65
Gene3D
T-box_sf (IPR036960) - T[1-160] 3.9E-65
SUPERFAMILY
p53-like_TF_DNA-bd (IPR008967) - T[1-155] 2.98E-58
ProSiteProfiles
TF_T-box (IPR001699) - T[1-155] 58.993
Pfam
TF_T-box (IPR001699) - T[1-155] 4.7E-58
PRINTS
TF_Brachyury (IPR002070) - T[34-54] 8.2E-5 - T[96-113] 8.2E-5
PRINTS
TF_T-box (IPR001699) - T[54-67] 1.0E-25 - T[71-80] 1.0E-25 - T[91-105] 1.0E-25 - T[126-139] 1.0E-25 - T[147-155] 1.0E-25
ProSitePatterns
TF_T-box_CS (IPR018186) - T[55-73] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TBX6_HUMAN 50.955 % 182 7.29E-56
TBX3_HUMAN 44.318 % 177 4.52E-52
TBX4_HUMAN 45.641 % 176 1.77E-52