- Transcript 'Moocul.CG.ELv1_2.S12...' >
- Transcript 'KH2012:KH.S654.3.v1....' >
- Transcript 'KH2012:KH.C4.435.v2....' >
- Transcript 'Moocul.CG.ELv1_2.S24...' >
- Transcript 'Cisavi.CG.ENS81.R156...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R156.157534-169654.14316.t
Possible name(s)
TBX3; TBX4; TBX6
Gene model
Location
R156 [164,988 / 165,816]
Amino acid sequence
Length: 183
>Cisavi.CG.ENS81.R156.157534-169654.14316.p
LWDNFSAAQTEMIVTKTGRRMFPGYRVKMTGMDPNAQYCVLLDISSVDENRYKFQHGKWL
IAGRGEPHIPQRFYLHPNSPCTGQQWMKDIVSFHKVKLTNSCGNCGDGKFLVHSMHRYQP
RVHIVQTDDVNTLHLQPMSTFAFPQTSFTTVTAYQNGEIAKLKIANNPYARGFREDGAKT
MKA
Nucleotide sequence
Length: 654
>Cisavi.CG.ENS81.R156.157534-169654.14316.t
ACGAAGATTCTAGAACATTAAAAGATGATAATGAAAATTGCAAATTCAAACCATCAAGCG
ATGAGCTCACGATCCGGACCGCAAGTTCATCTTCACGATGTGCAGTTATGGGACAACTTC
TCAGCTGCTCAGACTGAAATGATTGTTACTAAAACCGGAAGGCGAATGTTTCCTGGTTAC
CGAGTTAAAATGACTGGGATGGACCCGAACGCTCAGTATTGCGTATTGTTGGACATTTCG
AGTGTGGATGAAAACAGATACAAGTTTCAACACGGGAAGTGGCTGATAGCTGGTCGTGGA
GAACCACATATCCCACAAAGATTTTATTTGCACCCGAACTCACCTTGTACCGGACAACAA
TGGATGAAAGATATCGTTTCTTTCCACAAAGTTAAATTAACCAACTCATGTGGGAATTGT
GGAGACGGAAAGTTCCTCGTACATTCCATGCATCGATATCAACCTCGCGTCCACATTGTT
CAAACTGATGACGTCAATACGTTACATCTTCAACCGATGTCAACTTTCGCTTTCCCACAA
ACTTCCTTTACAACGGTCACAGCATACCAGAACGGGGAGATCGCTAAGTTAAAGATCGCC
AACAACCCTTACGCCCGAGGCTTCAGAGAAGACGGAGCGAAGACTATGAAAGCG
| Gene3D |
T-box_sf (IPR036960) - T[1-180] 1.8E-77 |
| CDD |
TF_T-box (IPR001699) - T[1-177] 6.87445E-106 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[1-175] 68.559 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[1-20] . - T[75-93] . |
| SMART |
TF_T-box (IPR001699) - T[1-180] 5.2E-91 |
| PANTHER |
TF_T-box (IPR001699) - T[1-181] 1.1E-114 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[1-175] 3.35E-69 |
| Pfam |
TF_T-box (IPR001699) - T[1-175] 7.6E-72 |
| PRINTS |
TF_T-box (IPR001699) - T[9-33] 6.2E-41 - T[74-87] 6.2E-41 - T[91-100] 6.2E-41 - T[111-125] 6.2E-41 - T[146-159] 6.2E-41 - T[167-175] 6.2E-41 |
| PRINTS |
TF_Brachyury (IPR002070) - T[54-74] 7.1E-5 - T[116-133] 7.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 53.107 % | 211 | 2.54E-67 |
| TBX2_HUMAN | 49.718 % | 207 | 9.47E-64 |
| TBX4_HUMAN | 52.809 % | 201 | 1.35E-62 |