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  1. Clone 'cien80390'
  2. Clone 'AHC0AAA98YP05'
  3. Clone 'cien50076'
  4. Clone 'cilv033c03'
  5. Transcript 'Cisavi.CG.ENS81.R156...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R156.610710-623806.16074.t

Possible name(s)

CDH11; CDH4; CDH6

Location

R156 [611,274 / 622,058]

Sequences

Amino acid sequence

Length: 651

>Cisavi.CG.ENS81.R156.610710-623806.16074.p
VEDRNDNSPIFNVATLQGSVREDASPGTPVTTVVATDRDDPTGLDQYGFVSYKLATSPED
PPAPGGQRRFAISESGVITVVGNLDVETAPSVKVVIQAKDGMVNSPGNQVTATATIQISD
ANNRAPVFEGRPYNAKQGELLPLRSTVYSISASDADIDPANKAVTFTITAGDTGGVFDIH
SNFQGGVTQGDITLEKPLDYEKGPKQFILTVNAKNELATNSDDTLYQVDTTVIIDVLDEN
EPPVFINQPYNGAVTENQGPEPNIARVRAQDYDFGGNQTVTYAIVSTEGWFSINEEGSIS
SIAPVDREHPAVNQTSSIYTLVVSSTDNSTSTANVAIRINDKNDNAPEPDGPWTVTICEV
PPEPRVTTINIKDKDEPKNGPPFTVTIDDASGLWVLENENPMARSVATLTKSFDVNQQSK
YELPIIMSDGPSPPEPRLTSTATLTINICRCNDKGELNCETMVPIAGAGFPVALLIAIIA
AILILLIIVLAVVAYRRRQQAGLEKEILLDDDDVRENLQAYHDEGGGEEDNDGYDISALQ
APPPNSVKPKVIDVRPLGGAQPESRRPIQPDTDIGNYIGDAKQQADNDPTAPPFDSLLVF
DYEGQGSDAGSLSSINSGTTDASQDYDYLNNWGPRFKKLADMYGGGEIPFP

Nucleotide sequence

Length: 2,239

>Cisavi.CG.ENS81.R156.610710-623806.16074.t
TTACCCGCCAATACGGATACGTGAGACCATTGAGGGAGATCCACCTTTTCAAACAAAAAA
GCTTTTGGATATCACAAACAACAATGCAAACGTGATGTCATATGAATTGGAAGGACAGGA
CCCCAATAAGTTTTCCATTGAATTCAACGCAGCCGTTCCCAGTGATCCTGCATTTATCTG
GCAGTTGGTGGCCCTTGACCGAGAAGAATTCAGCACCTACTTGTTTTACGCAGTGGTGCG
GGATGCAGCTGGCAATGAGTTGGACAGAGTAAAGTTGGACGTTATAGTAGAAGACAGAAA
TGACAATTCACCAATTTTCAATGTTGCAACTTTGCAAGGAAGTGTGCGAGAAGACGCCTC
ACCAGGAACTCCTGTGACAACAGTGGTTGCCACCGACCGGGATGATCCAACTGGACTCGA
TCAATACGGCTTTGTGTCGTACAAACTCGCAACAAGTCCAGAGGACCCACCAGCACCAGG
AGGACAACGTCGGTTTGCCATATCTGAAAGTGGCGTGATCACAGTTGTTGGGAACTTGGA
TGTGGAAACGGCTCCGTCCGTCAAAGTCGTCATTCAAGCCAAGGATGGAATGGTTAACAG
CCCTGGCAATCAGGTAACAGCTACAGCCACCATTCAAATCTCTGACGCCAACAATCGCGC
TCCTGTGTTCGAAGGCCGGCCATACAACGCAAAGCAAGGGGAATTGTTGCCACTACGATC
AACAGTGTATAGCATCAGCGCTTCAGATGCTGATATTGATCCAGCTAATAAAGCAGTTAC
ATTCACCATCACTGCTGGCGACACTGGAGGGGTGTTCGATATCCATTCAAACTTCCAAGG
TGGCGTCACTCAAGGGGACATCACGTTAGAAAAGCCGCTGGACTATGAGAAAGGGCCGAA
GCAGTTTATACTTACCGTCAACGCCAAGAACGAACTTGCAACAAATAGCGACGATACTCT
ATACCAGGTGGATACAACTGTCATTATTGATGTTCTTGATGAAAATGAACCACCGGTCTT
TATCAACCAACCTTACAATGGAGCTGTCACTGAGAATCAAGGCCCTGAACCCAACATAGC
TCGTGTCCGTGCTCAAGATTATGATTTTGGTGGAAACCAAACAGTAACATATGCGATAGT
CAGCACTGAAGGATGGTTCTCCATCAATGAAGAGGGAAGCATCAGCTCCATTGCTCCAGT
GGACCGGGAGCATCCAGCTGTCAATCAAACCAGCAGCATCTACACACTGGTTGTTAGCTC
CACCGACAACTCCACATCTACTGCAAATGTTGCGATACGGATTAACGATAAAAATGACAA
CGCACCTGAACCTGATGGCCCATGGACCGTCACGATATGCGAAGTACCCCCTGAACCCAG
GGTCACAACCATCAATATTAAAGACAAGGACGAACCAAAGAATGGACCACCTTTCACAGT
TACCATCGATGACGCATCCGGACTTTGGGTGCTTGAAAATGAAAACCCAATGGCGCGCTC
GGTGGCGACGTTGACGAAAAGCTTCGACGTCAACCAGCAATCGAAGTACGAACTCCCCAT
CATAATGTCGGACGGACCATCCCCACCTGAACCTCGGCTTACCAGCACTGCCACTCTCAC
CATCAACATTTGCCGCTGTAATGACAAGGGAGAGTTAAACTGTGAGACCATGGTGCCGAT
AGCTGGGGCAGGATTTCCAGTCGCTCTGCTTATCGCTATAATCGCTGCCATACTTATCCT
ACTCATTATCGTTCTGGCTGTTGTTGCTTATCGGCGACGACAACAAGCCGGTCTCGAGAA
GGAAATCCTGCTCGATGATGACGACGTGCGAGAGAATCTGCAAGCTTATCACGATGAAGG
GGGCGGCGAGGAAGACAATGATGGATATGACATCAGCGCTTTACAAGCACCCCCTCCCAA
CTCTGTTAAGCCGAAAGTTATTGATGTGCGGCCACTAGGAGGTGCTCAACCTGAGAGTCG
ACGGCCGATTCAACCAGACACCGATATCGGAAATTATATCGGCGATGCGAAACAACAAGC
GGACAACGACCCCACAGCGCCACCATTTGATTCCCTCCTTGTGTTCGACTACGAGGGACA
GGGGTCGGACGCCGGCTCGCTCAGCTCCATCAACTCTGGGACCACTGACGCCTCCCAGGA
CTACGATTACCTGAACAACTGGGGCCCGAGGTTCAAGAAGCTGGCCGACATGTACGGGGG
TGGCGAGATACCCTTTCCA

InterProScan

SUPERFAMILY
Cadherin-like (IPR015919) - T[1-111] 1.23E-16 - T[122-241] 2.71E-12 - T[234-350] 2.36E-19 - T[343-449] 6.42E-12
PRINTS
Cadherin (IPR002126) - T[11-40] 3.6E-19 - T[91-103] 3.6E-19 - T[107-126] 3.6E-19 - T[126-139] 3.6E-19 - T[188-214] 3.6E-19 - T[331-348] 3.6E-19
Pfam
Cadherin (IPR002126) - T[18-118] 3.4E-12 - T[133-225] 5.8E-10 - T[250-339] 9.9E-14 - T[355-449] 4.2E-9
SMART
Cadherin (IPR002126) - T[33-126] 3.1E-11 - T[150-244] 3.3E-6 - T[267-347] 8.2E-17 - T[369-456] 0.01
ProSitePatterns
Cadherin_CS (IPR020894) - T[337-347] .
Pfam
Cadherin_cytoplasmic-dom (IPR000233) - T[505-645] 5.8E-48
Gene3D
Catenin_binding_dom_sf (IPR027397) - T[553-648] 6.1E-36

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CAD12_HUMAN 34.337 % 302 3.39E-92
CADH6_HUMAN 34.802 % 305 1.33E-93
CAD11_HUMAN 38.06 % 322 1.57E-99





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