- EST 'FF724011.1' >
- Transcript 'KH2012:KH.L155.16.v1...' >
- Transcript 'KH2012:KH.C11.334.v1...' >
- Transcript 'KH2012:KH.C10.330.v1...' >
- Transcript 'Cisavi.CG.ENS81.R156...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R156.610710-623806.16076.t
Possible name(s)
CDH11; CDH4; CDH6
Gene model
Location
R156 [611,360 / 623,806]
Amino acid sequence
Length: 795
>Cisavi.CG.ENS81.R156.610710-623806.16076.p
MRGDGYGILLIFLILMQIIISSEGTFETRLLNAVRKNRVKRSWIYPPIRIRETIEGDPPF
QTKKLLDITNNNANVMSYELEGQDPNKFSIEFNAAVPSDPAFIWQLVALDREEFSTYLFY
AVVRDAAGNELDRVKLDVIVEDRNDNSPIFNVATLQGSVREDASPGTPVTTVVATDRDDP
TGLDQYGFVSYKLATSPEDPPAPGGQRRFAISESGVITVVGNLDVETAPSVKVVIQAKDG
MVNSKFQISVTATATIQISDANNRAPVFEGRPYNAKQGELLPLRSTVYSISASDADIDPA
NKAVTFTITAGDTGGVFDIHSNFQGGVTQGDITLEKPLDYEKGPKQFILTVNAKNELATN
SDDTLYQASTTVIIDVLDENEPPVFINQPYNGAVTENQGPEPNIARVRAQDYDFGGNQTV
TYAIVSTEGWFSINEEGSISSIAPVDREHPAVNQTSSIYTLVVSSTDNYRVKATSTANVA
IRINDKNDNAPEPDGPWTVTICEVPPEPRVTTINIKDKDEPKNGPPFTVTIDDASGLWVL
ENVAENPMARSVATLTKSFDVNQQSKYELPIIMSDGPSPPEPRLTSTATLTINICRCNDK
GELNCETMVPIAGAGFPVALLIAIIAAILILLIIVLAVVAYRRRQQAGLEKEILLDDDDV
RENLQAYHDEGGGEEDNDGYDISALQAPPPNSVKPKVIDVRPLGGAQPESRRPIQPDTDI
GNYIGDAKQQADNDPTAPPFDSLLVFDYEGQGSDAGSLSSINSGTTDASQDYDYLNNWGP
RFKKLADMYGGGESE
Nucleotide sequence
Length: 2,466
>Cisavi.CG.ENS81.R156.610710-623806.16076.t
AGAGAAGTTTTTTGTGTTATTTTACTGAAGTTTGGATACCAAGAACCAGAAAAGACATAA
CAATAGTGGTTCGTTATGATGAGGGGAGATGGTTATGGGATTTTACTGATCTTTCTGATC
TTAATGCAGATCATAATTTCAAGTGAGGGAACTTTCGAAACTCGACTTTTGAATGCTGTG
AGAAAAAACAGAGTGAAAAGATCATGGATTTACCCGCCAATACGGATACGTGAGACCATT
GAGGGAGATCCACCTTTTCAAACAAAAAAGCTTTTGGATATCACAAACAACAATGCAAAC
GTGATGTCATATGAATTGGAAGGACAGGACCCCAATAAGTTTTCCATTGAATTCAACGCA
GCCGTTCCCAGTGATCCTGCATTTATCTGGCAGTTGGTGGCCCTTGACCGAGAAGAATTC
AGCACCTACTTGTTTTACGCAGTGGTGCGGGATGCAGCTGGCAATGAGTTGGACAGAGTA
AAGTTGGACGTTATAGTAGAAGACAGAAATGACAATTCACCAATTTTCAATGTTGCAACT
TTGCAAGGAAGTGTGCGAGAAGACGCCTCACCAGGAACTCCTGTGACAACAGTGGTTGCC
ACCGACCGGGATGATCCAACTGGACTCGATCAATACGGCTTTGTGTCGTACAAACTCGCA
ACAAGTCCAGAGGACCCACCAGCACCAGGAGGACAACGTCGGTTTGCCATATCTGAAAGT
GGCGTGATCACAGTTGTTGGGAACTTGGATGTGGAAACGGCTCCGTCCGTCAAAGTCGTC
ATTCAAGCCAAGGATGGAATGGTTAACAGTAAGTTTCAGATCTCTGTAACAGCTACAGCC
ACCATTCAAATCTCTGACGCCAACAATCGCGCTCCTGTGTTCGAAGGCCGGCCATACAAC
GCAAAGCAAGGGGAATTGTTGCCACTACGATCAACAGTGTATAGCATCAGCGCTTCAGAT
GCTGATATTGATCCAGCTAATAAAGCAGTTACATTCACCATCACTGCTGGCGACACTGGA
GGGGTGTTCGATATCCATTCAAACTTCCAAGGTGGCGTCACTCAAGGGGACATCACGTTA
GAAAAGCCGCTGGACTATGAGAAAGGGCCGAAGCAGTTTATACTTACCGTCAACGCCAAG
AACGAACTTGCAACAAATAGCGACGATACTCTATACCAGGCAAGTACAACTGTCATTATT
GATGTTCTTGATGAAAATGAACCACCGGTCTTTATCAACCAACCTTACAATGGAGCTGTC
ACTGAGAATCAAGGCCCTGAACCCAACATAGCTCGTGTCCGTGCTCAAGATTATGATTTT
GGTGGAAACCAAACAGTAACATATGCGATAGTCAGCACTGAAGGATGGTTCTCCATCAAT
GAAGAGGGAAGCATCAGCTCCATTGCTCCAGTGGACCGGGAGCATCCAGCTGTCAATCAA
ACCAGCAGCATCTACACACTGGTTGTTAGCTCCACCGACAACTACCGCGTCAAAGCCACA
TCTACTGCAAATGTTGCGATACGGATTAACGATAAAAATGACAACGCACCTGAACCTGAT
GGCCCATGGACCGTCACGATATGCGAAGTACCCCCTGAACCCAGGGTCACAACCATCAAT
ATTAAAGACAAGGACGAACCAAAGAATGGACCACCTTTCACAGTTACCATCGATGACGCA
TCCGGACTTTGGGTGCTTGAAAATGTGGCAGAAAACCCAATGGCGCGCTCGGTGGCGACG
TTGACGAAAAGCTTCGACGTCAACCAGCAATCGAAGTACGAACTCCCCATCATAATGTCG
GACGGACCATCCCCACCTGAACCTCGGCTTACCAGCACTGCCACTCTCACCATCAACATT
TGCCGCTGTAATGACAAGGGAGAGTTAAACTGTGAGACCATGGTGCCGATAGCTGGGGCA
GGATTTCCAGTCGCTCTGCTTATCGCTATAATCGCTGCCATACTTATCCTACTCATTATC
GTTCTGGCTGTTGTTGCTTATCGGCGACGACAACAAGCCGGTCTCGAGAAGGAAATCCTG
CTCGATGATGACGACGTGCGAGAGAATCTGCAAGCTTATCACGATGAAGGGGGCGGCGAG
GAAGACAATGATGGATATGACATCAGCGCTTTACAAGCACCCCCTCCCAACTCTGTTAAG
CCGAAAGTTATTGATGTGCGGCCACTAGGAGGTGCTCAACCTGAGAGTCGACGGCCGATT
CAACCAGACACCGATATCGGAAATTATATCGGCGATGCGAAACAACAAGCGGACAACGAC
CCCACAGCGCCACCATTTGATTCCCTCCTTGTGTTCGACTACGAGGGACAGGGGTCGGAC
GCCGGCTCGCTCAGCTCCATCAACTCTGGGACCACTGACGCCTCCCAGGACTACGATTAC
CTGAACAACTGGGGCCCGAGGTTCAAGAAGCTGGCCGACATGTACGGGGGTGGCGAGAGT
GAATGA
| SMART |
Cadherin (IPR002126) - T[61-148] 0.0057 - T[172-266] 6.5E-11 - T[290-384] 8.8E-8 - T[407-491] 2.7E-16 - T[513-602] 0.02 |
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[71-150] 7.57E-7 - T[144-260] 2.36E-17 - T[262-381] 1.27E-12 - T[374-494] 2.0E-20 - T[487-595] 3.0E-12 |
| ProSitePatterns |
Cadherin_CS (IPR020894) - T[138-148] . - T[481-491] . |
| PRINTS |
Cadherin (IPR002126) - T[150-179] 2.8E-19 - T[230-242] 2.8E-19 - T[247-266] 2.8E-19 - T[266-279] 2.8E-19 - T[328-354] 2.8E-19 - T[475-492] 2.8E-19 |
| Pfam |
Cadherin (IPR002126) - T[157-258] 6.7E-11 - T[273-375] 5.7E-10 - T[390-483] 2.1E-14 - T[499-595] 4.3E-8 |
| Pfam |
Cadherin_cytoplasmic-dom (IPR000233) - T[651-791] 8.1E-48 |
| Gene3D |
Catenin_binding_dom_sf (IPR027397) - T[699-795] 4.2E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CADH4_HUMAN | 35.287 % | 335 | 3.87E-102 |
| CADH6_HUMAN | 33.333 % | 321 | 8.86E-98 |
| CAD11_HUMAN | 35.587 % | 332 | 9.16E-102 |