- Transcript 'KH2012:KH.C1.546.v2....' >
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- Transcript 'Cisavi.CG.ENS81.R156...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R156.610710-623806.16077.t
Possible name(s)
CDH11; CDH4; CDH6
Gene model
Location
R156 [611,360 / 619,728]
Amino acid sequence
Length: 411
>Cisavi.CG.ENS81.R156.610710-623806.16077.p
ASTTVIIDVLDENEPPVFINQPYNGAVTENQGPEPNIARVRAQDYDFGGNQTVTYAIVST
EGWFSINEEGSISSIAPVDREHPAVNQTSSIYTLVVSSTDNYRVKATSTANVAIRINDKN
DNAPEPDGPWTVTICEVPPEPRVTTINIKDKDEPKNGPPFTVTIDDASGLWVLENGKSVL
VYNQLRVYLSRQLFKICAILNIKCPPHTVVMKNTISGILVRCPNPWLWRLCPLYLQSSLP
LFCCSVSSFIVLAVVAYRRRQQAGLEKEILLDDDDVRENLQAYHDEGGGEEDNDGYDISA
LQAPPPNSVKPKVIDVRPLGGAQPESRRPIQPDTDIGNYIGDAKQQADNDPTAPPFDSLL
VFDYEGQGSDAGSLSSINSGTTDASQDYDYLNNWGPRFKKLADMYGGGESE
Nucleotide sequence
Length: 1,380
>Cisavi.CG.ENS81.R156.610710-623806.16077.t
CATTCAAACTTCCAAGGTGGCGTCACTCAAGGGGACATCACGTTAGAAAAGCCGCTGGAC
TATGAGAAAGGGCCGAAGCAGTTTATACTTACCGTCAACGCCAAGAACGAACTTGCAACA
AATAGCGACGATACTCTATACCAGGCAAGTACAACTGTCATTATTGATGTTCTTGATGAA
AATGAACCACCGGTCTTTATCAACCAACCTTACAATGGAGCTGTCACTGAGAATCAAGGC
CCTGAACCCAACATAGCTCGTGTCCGTGCTCAAGATTATGATTTTGGTGGAAACCAAACA
GTAACATATGCGATAGTCAGCACTGAAGGATGGTTCTCCATCAATGAAGAGGGAAGCATC
AGCTCCATTGCTCCAGTGGACCGGGAGCATCCAGCTGTCAATCAAACCAGCAGCATCTAC
ACACTGGTTGTTAGCTCCACCGACAACTACCGCGTCAAAGCCACATCTACTGCAAATGTT
GCGATACGGATTAACGATAAAAATGACAACGCACCTGAACCTGATGGCCCATGGACCGTC
ACGATATGCGAAGTACCCCCTGAACCCAGGGTCACAACCATCAATATTAAAGACAAGGAC
GAACCAAAGAATGGACCACCTTTCACAGTTACCATCGATGACGCATCCGGACTTTGGGTG
CTTGAAAATGGTAAGTCGGTACTAGTATACAATCAGCTAAGAGTATATTTAAGCAGGCAG
TTGTTTAAAATTTGTGCGATTTTAAACATTAAATGTCCTCCACACACAGTTGTGATGAAG
AATACAATATCCGGGATTCTTGTGCGTTGCCCAAACCCGTGGTTGTGGCGACTTTGCCCA
TTATACTTGCAGTCATCGCTGCCATTATTCTGCTGCTCAGTGAGTAGTTTTATCGTTCTG
GCTGTTGTTGCTTATCGGCGACGACAACAAGCCGGTCTCGAGAAGGAAATCCTGCTCGAT
GATGACGACGTGCGAGAGAATCTGCAAGCTTATCACGATGAAGGGGGCGGCGAGGAAGAC
AATGATGGATATGACATCAGCGCTTTACAAGCACCCCCTCCCAACTCTGTTAAGCCGAAA
GTTATTGATGTGCGGCCACTAGGAGGTGCTCAACCTGAGAGTCGACGGCCGATTCAACCA
GACACCGATATCGGAAATTATATCGGCGATGCGAAACAACAAGCGGACAACGACCCCACA
GCGCCACCATTTGATTCCCTCCTTGTGTTCGACTACGAGGGACAGGGGTCGGACGCCGGC
TCGCTCAGCTCCATCAACTCTGGGACCACTGACGCCTCCCAGGACTACGATTACCTGAAC
AACTGGGGCCCGAGGTTCAAGAAGCTGGCCGACATGTACGGGGGTGGCGAGAGTGAATGA
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[7-127] 7.14E-21 |
| PRINTS |
Cadherin (IPR002126) - T[18-47] 7.3E-8 - T[91-103] 7.3E-8 - T[108-125] 7.3E-8 |
| Pfam |
Cadherin (IPR002126) - T[23-116] 7.6E-15 |
| SMART |
Cadherin (IPR002126) - T[40-124] 2.7E-16 |
| ProSitePatterns |
Cadherin_CS (IPR020894) - T[114-124] . |
| Pfam |
Cadherin_cytoplasmic-dom (IPR000233) - T[267-407] 2.4E-48 |
| Gene3D |
Catenin_binding_dom_sf (IPR027397) - T[315-411] 1.5E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CAD12_HUMAN | 32.802 % | 188 | 6.3E-53 |
| CADH6_HUMAN | 32.494 % | 186 | 2.6E-52 |
| CAD11_HUMAN | 35.321 % | 206 | 1.31E-59 |