- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C1.263.v1....' >
- Transcript 'KH2012:KH.C6.115.v2....' >
- Transcript 'Cisavi.CG.ENS81.R1.5...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R1.5687906-5691827.20193.t
Possible name(s)
ADRA1A; HTR1A; MTNR1A
Gene model
Location
R1 [5,687,905 / 5,691,827]
Amino acid sequence
Length: 375
>Cisavi.CG.ENS81.R1.5687906-5691827.20193.p
MENLTSNGSEIYKLPFVEIPFLSIVIVIGVVGNLFVIGAVRCERRLKNCGVGFVINLAIA
DLAITAWYLPIVLANVASDYRNILADSKLCHFTALLSNVCCETSMFTLMFISMNRYWKIT
KPNSYYRWFGGRKTLGWIAFIWLLSFLLALPLLVGWAGSSPLVTFDVKMMSCMWNDHSEY
GYNIFLVSTAIFVPICTTAFFYIKIFAHVRKSRKRAAAREIASPNGSSSRVTQHSSVSDD
PPSSAMQNVRSHHSRHSSINAHKMSRSKRIGERDRALMMTLFIVIIFFLLFWLPYGVMTL
IWRHNVTALAKRACGWLALSNSAINSIIYGATNRHFRRGYVKLLKRINDVLCCGRKLTTP
RGMTSEIKQPSVKFG
Nucleotide sequence
Length: 1,337
>Cisavi.CG.ENS81.R1.5687906-5691827.20193.t
GTTCTTGTCCCTTACCCACAATTTTCATTGTTTGCTCGAATACGTTGTACTTGTGATGAC
ATAGTGTAAAGTAATTGAGTAATCGATGGAGAATCTGACAAGTAACGGAAGTGAGATCTA
CAAACTACCATTTGTCGAAATTCCATTTCTTTCTATTGTGATCGTTATCGGTGTTGTTGG
AAACTTGTTCGTGATCGGGGCTGTACGATGCGAAAGAAGATTAAAGAATTGTGGTGTTGG
TTTTGTCATTAACCTTGCCATTGCTGATTTGGCCATCACGGCGTGGTATCTGCCGATTGT
GTTGGCGAATGTTGCCTCGGATTACAGAAACATCCTAGCAGATTCCAAATTATGTCACTT
CACCGCATTGCTATCCAATGTATGCTGCGAGACATCCATGTTCACTCTGATGTTTATATC
CATGAACAGATATTGGAAAATCACAAAACCTAATTCGTACTATAGATGGTTTGGTGGAAG
AAAAACGCTTGGATGGATTGCATTCATCTGGCTCCTCAGCTTTCTTTTAGCTCTTCCATT
GTTGGTTGGCTGGGCTGGGAGTTCCCCGTTAGTGACATTTGACGTGAAAATGATGTCTTG
CATGTGGAACGATCACTCGGAATACGGATACAATATTTTTCTTGTGTCCACCGCCATTTT
TGTTCCCATTTGCACGACTGCGTTTTTCTACATCAAGATATTCGCTCACGTAAGAAAATC
GCGGAAGAGGGCGGCAGCACGGGAAATAGCGTCACCTAACGGATCATCAAGCAGAGTCAC
GCAGCATTCTTCCGTATCTGATGACCCACCATCATCGGCGATGCAGAACGTCCGATCGCA
CCATTCACGCCATAGCTCCATAAATGCCCACAAGATGTCGCGCTCAAAGAGAATCGGGGA
GCGCGATCGGGCGTTAATGATGACCTTGTTTATTGTCATCATTTTCTTCCTCTTGTTTTG
GCTTCCGTACGGCGTTATGACTTTGATATGGCGTCATAATGTAACCGCCTTGGCAAAGCG
AGCGTGTGGGTGGCTGGCTCTAAGTAACAGTGCAATCAATAGTATCATTTATGGTGCCAC
AAACCGTCATTTTCGTCGTGGATACGTCAAGCTTTTAAAGAGAATTAATGACGTCTTGTG
CTGCGGAAGAAAGTTGACCACTCCACGCGGAATGACCTCTGAAATCAAACAGCCAAGCGT
AAAATTCGGATAATGTTGTATTTTTTTATATTTTCTGTTTCCACATCTTGCCATATTGAA
GCAAGGTACTATTCCCTTTGTACTGTCTGAACTGTGGATTTCTTTTTATGCCCAATAAAA
TTATTGTTTTTATACAA
| PANTHER |
Mel_rcpt_1 (IPR027459) - T[4-362] 2.7E-103 |
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[17-41] 3.1E-31 - T[50-71] 3.1E-31 - T[97-119] 3.1E-31 - T[133-154] 3.1E-31 - T[183-206] 3.1E-31 - T[277-301] 3.1E-31 - T[311-337] 3.1E-31 |
| SMART |
GPCR_Rhodpsn (IPR000276) - T[26-344] 0.0069 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[32-329] 2.3E-42 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[32-329] 34.294 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[103-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTR1A_HUMAN | 25.513 % | 105 | 1.1E-25 |
| ADA1A_HUMAN | 26.05 % | 109 | 2.35E-26 |
| 5HT1A_HUMAN | 24.675 % | 109 | 1.51E-26 |