- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R1.5...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R1.597154-599373.05137.t
Possible name(s)
DDX10; DDX18; DDX55
Gene model
Location
R1 [597,153 / 599,373]
Amino acid sequence
Length: 561
>Cisavi.CG.ENS81.R1.597154-599373.05137.p
SRIRSVGMAGNEIQSYKAWKGKKRNGKRKFGNKFKKKVAKEEIISLDGFDPTKVEKFEDF
PLTSRTKAGLRKGNFVTPTAIQRAAINPGLTGKDVLGGAKTGSGKTLAFIIPILECLNKL
DWNALDGPGALVISPTRELAYQIFEVLKVVGCKHNFSAGLLIGGNNVEEEARSVGRTNII
ICTPGRLLQHMDSTSYFHLNNLKILVLDEADRILDMGFRSALDAILQNLPIERQTLLFSA
TQTKSVKDLARLSLRDPVYISVHSEAKHATPSGLKQRYISCNLGDKINILYSFLRSHTKS
KCLVFVSSCKQVSFLFAAFCKLRPGVSLMHLHGRMNQVRRMSVYQEFCRKKFAVLFATDI
AARGLDFPEVDWVVQLDCPEDADTYIHRAGRTARYNGNGNALLVLLPSEKNQMLKHLQKK
KVPISLSEINMNKVGEIDGKLQSFCAEDKEFKAKAQRSFVAYIRSVFLMKDKSVFNPLKL
PFVEFSSSLGLAIPPRVRFLERHIKAQKAQKAQGSLGSQGGEAASKESGFGNSDNDLSDD
DNDVIANDDIDNTEDDSSDDD
Nucleotide sequence
Length: 1,683
>Cisavi.CG.ENS81.R1.597154-599373.05137.t
TCCAGGATTAGATCTGTAGGGATGGCTGGTAATGAGATCCAAAGTTACAAAGCTTGGAAG
GGGAAGAAAAGAAATGGAAAACGTAAATTTGGGAATAAATTCAAGAAAAAAGTCGCCAAA
GAAGAAATCATTTCCTTGGATGGTTTTGATCCAACCAAAGTTGAAAAGTTTGAAGATTTC
CCGCTCACAAGCCGCACAAAGGCTGGGTTAAGAAAAGGAAATTTTGTGACACCCACCGCG
ATCCAACGTGCGGCCATTAATCCTGGTTTAACAGGGAAAGATGTATTAGGGGGAGCGAAA
ACGGGGTCTGGGAAGACTTTAGCCTTCATCATTCCTATCCTTGAATGTTTAAACAAACTT
GATTGGAACGCATTAGATGGTCCTGGAGCTCTGGTGATTTCCCCAACTAGAGAACTTGCA
TATCAAATATTCGAAGTATTGAAGGTGGTTGGTTGTAAACATAATTTCTCTGCTGGTCTT
CTCATCGGAGGGAACAATGTGGAGGAAGAAGCAAGGAGTGTGGGGAGGACCAACATCATC
ATATGTACTCCCGGAAGACTCCTTCAACATATGGATTCAACATCCTATTTCCACCTCAAC
AACTTAAAAATCTTGGTCCTTGATGAGGCGGATCGGATACTGGACATGGGATTCCGATCT
GCTCTCGATGCAATTTTGCAAAACCTGCCGATAGAGCGTCAAACTCTTCTATTTTCAGCA
ACGCAGACCAAATCTGTGAAGGATCTTGCAAGGTTAAGTCTGCGTGACCCAGTGTACATC
TCCGTCCATTCTGAAGCTAAACATGCCACGCCTTCAGGGCTGAAGCAGCGATATATAAGC
TGCAATCTCGGCGATAAAATCAACATTTTATATTCTTTCCTTCGTAGCCACACTAAGTCG
AAGTGCTTGGTTTTCGTGAGCAGTTGCAAACAAGTTTCGTTTTTATTCGCCGCATTCTGT
AAGCTTCGCCCAGGTGTGTCCCTCATGCACCTGCATGGCCGGATGAACCAGGTACGCCGG
ATGTCCGTCTACCAGGAGTTTTGTCGCAAGAAATTTGCTGTTTTGTTTGCGACGGACATT
GCAGCTCGTGGGCTGGATTTCCCGGAGGTGGATTGGGTGGTGCAACTCGACTGTCCTGAA
GACGCTGATACCTACATCCACCGAGCAGGCCGCACTGCACGATACAATGGCAACGGGAAT
GCATTGTTAGTTCTACTTCCATCCGAAAAAAATCAGATGTTGAAACATCTTCAGAAGAAA
AAAGTCCCGATTTCGCTCTCCGAGATCAACATGAACAAAGTTGGCGAAATTGATGGAAAG
TTGCAGTCTTTCTGTGCTGAGGACAAAGAATTTAAAGCGAAGGCACAACGAAGTTTTGTG
GCATACATTAGGTCGGTGTTTCTAATGAAAGATAAATCAGTGTTCAACCCATTGAAACTT
CCATTTGTCGAGTTCTCTAGCTCGCTTGGCCTTGCTATCCCCCCAAGAGTTCGGTTTCTA
GAGCGACATATCAAGGCGCAGAAAGCACAGAAGGCACAGGGGTCGCTGGGGTCACAGGGT
GGGGAAGCGGCTTCAAAGGAATCAGGGTTTGGCAATAGTGATAATGACTTATCAGACGAT
GATAATGATGTTATAGCTAACGATGACATAGACAATACTGAGGATGACTCATCAGATGAT
GAC
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[55-83] 9.106 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[74-277] 2.1E-55 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[79-249] 4.8E-44 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[86-260] 31.075 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[127-416] 5.52E-66 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[206-214] . |
| CDD |
Helicase_C (IPR001650) - T[274-404] 3.59583E-31 |
| Pfam |
Helicase_C (IPR001650) - T[285-395] 1.3E-25 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[286-437] 19.786 |
| SMART |
Helicase_C (IPR001650) - T[314-396] 9.6E-26 |
| SMART |
DUF4217 (IPR025313) - T[436-499] 2.1E-20 |
| Pfam |
DUF4217 (IPR025313) - T[438-497] 4.4E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX10_HUMAN | 60.706 % | 598 | 0 |
| DDX18_HUMAN | 42.759 % | 357 | 8.17E-116 |
| DDX55_HUMAN | 38.95 % | 279 | 2.07E-86 |