- Transcript 'KH2012:KH.C2.292.v2....' >
- Transcript 'KH2012:KH.C4.399.v1....' >
- Transcript 'Moocul.CG.ELv1_2.S59...' >
- Region 'REG00000681' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.1116447-1122123.11746.t
Possible name(s)
PABPC3; PUF60; U2AF2
Gene model
Location
R16 [1,116,598 / 1,121,871]
>Cisavi.CG.ENS81.R16.1116447-1122123.11746.p
EMKSREEKKDRDRGSSGRHRDRKRSRDRDRKKRSRSRSRGKRHRSRSRDRKRKSRSKERT
ERKPKKAYKYWDVPPIGYEHVTPLQYKAMQAAGQIPLMAATQPLNMAENAMQVCVLHTVP
SIYYFSNPIMPMAGSQMTRQARRLYVGNIPFGVTEDAMMDFFNNQMQIAGLTQAPGQPIL
AVQINLDKNFAFLEFRSVDETTHALAFDGINFMNQSLKIRRPSDYKPLPGSLDQPAIHLP
GVISTVVQDSQHKMFIGGLPNYLSDDQVKELLTSFGPLRAFNLVKDSATALSKGYAFAEF
ADYNLTDQAIAGLNGMALGDKKLIVQRASIGAKANPTGAIMAPVTLQIPGMAHATGAGPA
TQVLCLMNMVLAEELTDDEEYEEIMEDVKDECSKLGSVVSLEIPRPGPGLTEADGIGKIY
VEFASHLDAQKAAQALGGRKFSNRVVVTSFFDPESYHHRQFS
>Cisavi.CG.ENS81.R16.1116447-1122123.11746.t
GAGATGAAATCCCGGGAAGAGAAAAAGGATCGGGATCGTGGGAGTTCTGGGAGGCACAGA
GACAGAAAGAGGAGTAGGGATCGAGATCGAAAGAAGAGAAGCAGAAGTAGGAGCAGAGGA
AAAAGGCACCGTTCACGGAGTCGCGATCGCAAGAGGAAGTCTCGCAGCAAAGAGCGCACC
GAGCGCAAACCAAAGAAAGCGTACAAGTATTGGGACGTGCCGCCCATCGGATACGAGCAC
GTTACCCCTTTGCAATACAAAGCCATGCAAGCCGCTGGCCAAATTCCGTTGATGGCCGCT
ACTCAACCACTTAACATGGCTGAAAATGCAATGCAGGTATGTGTTTTGCATACAGTACCT
TCCATTTATTACTTTTCTAATCCAATAATGCCGATGGCTGGAAGTCAAATGACGCGTCAA
GCTCGCCGCTTATATGTCGGCAACATCCCATTCGGGGTGACAGAAGATGCGATGATGGAT
TTCTTCAACAACCAGATGCAAATCGCTGGCCTCACACAAGCCCCTGGTCAACCTATCCTT
GCTGTGCAAATCAACTTGGATAAGAATTTCGCGTTCTTGGAGTTCAGATCGGTCGACGAA
ACAACACATGCTCTCGCGTTTGATGGGATCAATTTCATGAATCAGTCGTTGAAGATTCGC
CGTCCAAGCGATTACAAACCACTGCCTGGATCGTTGGACCAGCCTGCGATCCACTTGCCC
GGTGTGATATCCACCGTGGTACAAGATTCTCAGCATAAGATGTTCATTGGTGGATTGCCC
AACTACCTTTCTGACGACCAAGTGAAAGAGCTTTTGACGTCATTTGGGCCACTTCGTGCG
TTCAACTTGGTCAAGGACAGCGCAACTGCCCTTTCAAAGGGCTACGCGTTCGCCGAGTTT
GCCGATTACAATCTGACGGACCAGGCTATAGCAGGGCTCAATGGAATGGCGCTTGGCGAT
AAGAAGCTGATTGTGCAACGTGCCAGTATTGGTGCTAAAGCCAATCCAACCGGAGCGATC
ATGGCACCAGTTACTCTACAGATACCCGGCATGGCTCACGCCACTGGTGCAGGACCAGCC
ACACAAGTCCTCTGCCTGATGAACATGGTGTTGGCTGAAGAGTTGACTGATGATGAGGAA
TATGAGGAGATCATGGAAGATGTCAAGGATGAATGTTCGAAACTTGGATCCGTCGTAAGC
CTCGAGATCCCTCGTCCCGGACCGGGGCTCACAGAAGCAGACGGCATCGGCAAGATCTAC
GTGGAGTTCGCGAGTCACCTCGACGCTCAAAAGGCGGCGCAGGCATTGGGCGGCCGCAAG
TTCTCAAACCGTGTCGTCGTCACGTCGTTTTTCGACCCGGAGAGCTACCATCACCGCCAA
TTCAGCTAAACGGATTTTTCGTAGTTTCTTTTCTCGATTGACGAGTCTGTATTATCGTTT
TGAGTCTGTCTGGTAGAAGTTTTCTGCGCCGTCTGTAGAACTGTTCAACCAACAACCAAT
TTAAATTGTCTCGAAAAATTAGTGGTTTTATTTTCGACGTTAAAAACTGCCGTTTCACCA
ACTGTGTTTGAAGTG
Pfam |
Tra (IPR010519) - T[8-90] 8.1E-7 |
TIGRFAM |
U2AF_lg (IPR006529) - T[50-461] 1.1E-143 |
ProSiteProfiles |
RRM_dom (IPR000504) - T[142-224] 13.072 - T[252-330] 15.903 - T[368-453] 9.61 |
Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[142-227] 7.2E-59 - T[228-231] 7.2E-59 - T[252-303] 7.2E-59 - T[304-325] 7.2E-59 - T[358-462] 9.5E-31 |
SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[142-226] 1.07E-18 - T[252-340] 2.17E-26 - T[369-456] 2.17E-26 |
SMART |
RRM_dom (IPR000504) - T[143-220] 3.8E-11 - T[253-326] 1.3E-15 - T[369-449] 0.41 |
Pfam |
RRM_dom (IPR000504) - T[144-217] 1.3E-6 - T[255-323] 1.5E-14 - T[386-446] 1.2E-5 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
U2AF2_HUMAN | 66.829 % | 520 | 0 |